VHEMI05522 (Torrubiella hemipterigena)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00172 (Zn_clus) IPR001138 VHEMI05522 T387757_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
col-21
M02600_2.00 		Neurospora crassa
CGGMGWTA
TAWCKCCG		 PBM
Weirauch et al.(2014)
pTH8945 		0.543 0.684
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
CEJ89697 Zinc cluster 28 67

Links

Other Zinc cluster family TFs
Other Torrubiella hemipterigena TFs

27 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BRADI3G41930 Brachypodium distachyon BRADI3G41930 N
BRADI3G41950 Brachypodium distachyon BRADI3G41950 N
BRADI4G35400 Brachypodium distachyon BRADI4G35400 N
GRMZM2G472671 Zea mays GRMZM2G472671 N
MLOC_40535 Hordeum vulgare MLOC_40535 N
Pavir.Fa00118 Panicum virgatum Pavir.Fa00118 N
Pavir.Fb00905 Panicum virgatum Pavir.Fb00905 N
Pavir.Fb02191 Panicum virgatum Pavir.Fb02191 N
Sb03g006500 Sorghum bicolor Sb03g006500 N
Sb03g006510 Sorghum bicolor Sb03g006510 N
Sb07g025310 Sorghum bicolor Sb07g025310 I
Sb07g025330 Sorghum bicolor Sb07g025330 N
Sb07g025340 Sorghum bicolor Sb07g025340 N
Si005033m.g Setaria italica Si005033m.g N
Si015024m.g Setaria italica Si015024m.g N
Si015026m.g Setaria italica Si015026m.g N
Si015072m.g Setaria italica Si015072m.g N
Si015343m.g Setaria italica Si015343m.g N
Traes_5BL_C753673FD Triticum aestivum Traes_5BL_C753673FD N
Traes_5BL_E86F89671 Triticum aestivum Traes_5BL_E86F89671 N
Traes_5DL_5DA6E1A09 Triticum aestivum Traes_5DL_5DA6E1A09 N
Traes_5DL_F32936F9C Triticum aestivum Traes_5DL_F32936F9C N