22689_YPR196W (Saccharomyces paradoxus)
Zinc cluster

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00172 (Zn_clus) IPR001138 22689_YPR196W T390828_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MAL63_YEASX
M11473_2.00 		Saccharomyces cerevisiae Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
F$MAL63_Q5 		0.614 0.895
YPR196W
M00110_2.00 		Saccharomyces cerevisiae
NCGGDNWWWH
DWWWNHCCGN		 PBM
Badis et al.(2008)
YPR196W_2047 		0.612 0.921
YPR196W
M01601_2.00 		Saccharomyces cerevisiae
CGGARAAA
TTTYTCCG		 PBM
Zhu et al.(2009)
Ypr196w 		0.612 0.921
YPR196W
M07537_2.00 		Saccharomyces cerevisiae
CGGRDWAWY
RWTWHYCCG		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0437.1 		0.612 0.921
YPR196W
M08700_2.00 		Saccharomyces cerevisiae
NNWNNBCGGRDAAWTHNNNND
HNNNNDAWTTHYCCGVNNWNN		 Misc
DeBoer et al.(2011)
YPR196W_861 		0.612 0.921
For this family, TFs with SR scores > 0.537 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
22689_YPR196W Zinc cluster 6 43

Links

Other Zinc cluster family TFs
Other Saccharomyces paradoxus TFs

8 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
8988_Multiple Saccharomyces mikatae 8988_Multiple I 0.643
8996_Multiple Saccharomyces mikatae 8996_Multiple I 0.643
9515_Multiple Saccharomyces paradoxus 9515_Multiple I 0.643
9523_Multiple Saccharomyces paradoxus 9523_Multiple I 0.643
MAL63_YEASX Saccharomyces cerevisiae MAL63_YEASX D 0.614
SKUD_144802 Saccharomyces kudriavzevii SKUD_144802 I 0.643
SKUD_186105 Saccharomyces kudriavzevii SKUD_186105 I 0.610
YPR196W Saccharomyces cerevisiae YPR196W D 0.612