CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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estExt_fgenesh1_pg.C_11203
(
Cryphonectria parasitica
)
Zinc cluster
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF00172 (Zn_clus)
IPR001138
estExt_fgenesh1_pg.C_11203
T391123_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU01243
M02588_2.00
Neurospora crassa
NNNSCGN
NCGSNNN
PBM
Weirauch et al.(2014)
pTH8917
0.544
0.939
For this family, TFs with SR scores >
0.537
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
estExt_fgenesh1_pg.C_11203
Zinc cluster
611
646
RCQRCRKSKKGCDRQRPCGRCRDAGIPAELCISEDE
Links
Other
Zinc cluster
family TFs
Other
Cryphonectria parasitica
TFs
130 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SVUK_0001310301
Strongylus vulgaris
SVUK_0001310301
N
Traes_4AL_69EEFB3DA
Triticum aestivum
Traes_4AL_69EEFB3DA
N
TRE_0000662901
Trichobilharzia regenti
TRE_0000662901
N