BGIOSGA020923 (Oryza indica)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 BGIOSGA020923 T000636_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
WIN1
M01603_2.00 		Arabidopsis thaliana
VCRCCGCNNN
NNNGCGGYGB		 PBM
Weirauch et al.(2014)
pTH7566 		0.810 0.941
ERF003
M06667_2.00 		Arabidopsis thaliana
DYCDCCRCCGYMDHHDYHN
NDRHDDHKRCGGYGGHGRH		 Dap-seq
OMalley et al.(2016)
ESE3_col_a 		0.754 0.843
ERF003
M06668_2.00 		Arabidopsis thaliana
HDYCKCCGCCGYHDH
DHDRCGGCGGMGRHD		 Dap-seq
OMalley et al.(2016)
ESE3_colamp_a 		0.754 0.843
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BGIOSGA020923-PA AP2 6 57

Links

Other AP2 family TFs
Other Oryza indica TFs

298 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SPL1 Arabidopsis thaliana AT2G47070 D 0.000
SPL12 Arabidopsis thaliana AT3G60030 D 0.000
estExt_fgenesh1_pg.C_1940033 Physcomitrella patens estExt_fgenesh1_pg.C_1940033 D 0.000
PK06791.1 Cannabis sativa PK06791.1 D 0.000
AMTR_s00022p00198330 Amborella trichopoda AMTR_s00022p00198330 I 0.000
AMTR_s00045p00076020 Amborella trichopoda AMTR_s00045p00076020 I 0.000
AMTR_s00106p00142470 Amborella trichopoda AMTR_s00106p00142470 I 0.000
BGIOSGA016888 Oryza indica BGIOSGA016888 I 0.000
BGIOSGA024253 Oryza indica BGIOSGA024253 I 0.000
BGIOSGA029541 Oryza indica BGIOSGA029541 I 0.000
Bo4g005730 Brassica oleracea Bo4g005730 I 0.000
Bo4g015800 Brassica oleracea Bo4g015800 I 0.000
Bo4g191350 Brassica oleracea Bo4g191350 I 0.000
Bra004674 Brassica rapa Bra004674 I 0.000
Bra016891 Brassica rapa Bra016891 I 0.000
Bra041037 Brassica rapa Bra041037 I 0.000
BRADI1G02760 Brachypodium distachyon BRADI1G02760 I 0.000
BRADI3G40030 Brachypodium distachyon BRADI3G40030 I 0.000
BRADI4G33770 Brachypodium distachyon BRADI4G33770 I 0.000
F775_10743 Aegilops tauschii F775_10743 I 0.000
F775_31139 Aegilops tauschii F775_31139 I 0.000
SPL1 Arabidopsis lyrata fgenesh2_kg.4__2943__AT2G47070.1 I 0.000
GLYMA01G15134 Glycine max GLYMA01G15134 I 0.000
GLYMA02G01160 Glycine max GLYMA02G01160 I 0.000
GLYMA02G30670 Glycine max GLYMA02G30670 I 0.000
GLYMA03G29901 Glycine max GLYMA03G29901 I 0.000
GLYMA06G36140 Glycine max GLYMA06G36140 I 0.000
GLYMA09G09790 Glycine max GLYMA09G09790 I 0.000
GLYMA10G01211 Glycine max GLYMA10G01211 I 0.000
GLYMA11G16556 Glycine max GLYMA11G16556 I 0.000
GLYMA12G27330 Glycine max GLYMA12G27330 I 0.000
GLYMA15G21860 Glycine max GLYMA15G21860 I 0.000
GLYMA18G36960 Glycine max GLYMA18G36960 I 0.000
GLYMA19G32800 Glycine max GLYMA19G32800 I 0.000
GRMZM2G126018 Zea mays GRMZM2G126018 I 0.000
GRMZM2G156756 Zea mays GRMZM2G156756 I 0.000
GRMZM2G160917 Zea mays GRMZM2G160917 I 0.000
GRMZM2G307588 Zea mays GRMZM2G307588 I 0.000
GSMUA_Achr2G01820_001 Musa acuminata GSMUA_Achr2G01820_001 I 0.000
GSMUA_Achr3G11170_001 Musa acuminata GSMUA_Achr3G11170_001 I 0.000
GSMUA_Achr3G24520_001 Musa acuminata GSMUA_Achr3G24520_001 I 0.000
GSMUA_Achr4G03880_001 Musa acuminata GSMUA_Achr4G03880_001 I 0.000
GSMUA_Achr5G22250_001 Musa acuminata GSMUA_Achr5G22250_001 I 0.000
GSMUA_Achr5G27280_001 Musa acuminata GSMUA_Achr5G27280_001 I 0.000
GSMUA_Achr6G22280_001 Musa acuminata GSMUA_Achr6G22280_001 I 0.000
GSMUA_Achr7G02020_001 Musa acuminata GSMUA_Achr7G02020_001 I 0.000
GSMUA_Achr7G20510_001 Musa acuminata GSMUA_Achr7G20510_001 I 0.000
GSMUA_Achr8G25550_001 Musa acuminata GSMUA_Achr8G25550_001 I 0.000
GSMUA_Achr9G22260_001 Musa acuminata GSMUA_Achr9G22260_001 I 0.000
GSMUA_Achr9G27660_001 Musa acuminata GSMUA_Achr9G27660_001 I 0.000
LPERR03G34030 Leersia perrieri LPERR03G34030 I 0.000
LPERR04G17030 Leersia perrieri LPERR04G17030 I 0.000
LPERR08G16940 Leersia perrieri LPERR08G16940 I 0.000
LPERR09G10900 Leersia perrieri LPERR09G10900 I 0.000
MLOC_4830 Hordeum vulgare MLOC_4830 I 0.000
MTR_1g053715 Medicago truncatula MTR_1g053715 I 0.000
MTR_1g086250 Medicago truncatula MTR_1g086250 I 0.000
MTR_7g092930 Medicago truncatula MTR_7g092930 I 0.000
MTR_7g444860 Medicago truncatula MTR_7g444860 I 0.000
MTR_8g463140 Medicago truncatula MTR_8g463140 I 0.000
OB03G47050 Oryza brachyantha OB03G47050 I 0.000
OB04G27960 Oryza brachyantha OB04G27960 I 0.000
OB08G26920 Oryza brachyantha OB08G26920 I 0.000
OB08G27190 Oryza brachyantha OB08G27190 I 0.000
OBART03G39900 Oryza barthii OBART03G39900 I 0.000
OBART04G20940 Oryza barthii OBART04G20940 I 0.000
OBART07G15570 Oryza barthii OBART07G15570 I 0.000
OBART09G14800 Oryza barthii OBART09G14800 I 0.000
OGLUM03G39810 Oryza glumaepatula OGLUM03G39810 I 0.000
OGLUM04G20870 Oryza glumaepatula OGLUM04G20870 I 0.000
OGLUM07G15250 Oryza glumaepatula OGLUM07G15250 I 0.000
OGLUM08G21260 Oryza glumaepatula OGLUM08G21260 I 0.000
OMERI03G36740 Oryza meridionalis OMERI03G36740 I 0.000
OMERI04G17360 Oryza meridionalis OMERI04G17360 I 0.000
OMERI07G12270 Oryza meridionalis OMERI07G12270 I 0.000
OMERI09G11520 Oryza meridionalis OMERI09G11520 I 0.000
ONIVA03G41820 Oryza nivara ONIVA03G41820 I 0.000
ONIVA04G19190 Oryza nivara ONIVA04G19190 I 0.000
ONIVA07G14170 Oryza nivara ONIVA07G14170 I 0.000
ONIVA08G22610 Oryza nivara ONIVA08G22610 I 0.000
ONIVA09G15400 Oryza nivara ONIVA09G15400 I 0.000
OPUNC03G37130 Oryza punctata OPUNC03G37130 I 0.000
OPUNC03G37170 Oryza punctata OPUNC03G37170 I 0.000
OPUNC04G18620 Oryza punctata OPUNC04G18620 I 0.000
OPUNC08G18140 Oryza punctata OPUNC08G18140 I 0.000
OPUNC09G13250 Oryza punctata OPUNC09G13250 I 0.000
ORGLA03G0367800 Oryza glaberrima ORGLA03G0367800 I 0.000
ORGLA04G0180000 Oryza glaberrima ORGLA04G0180000 I 0.000
ORGLA08G0176500 Oryza glaberrima ORGLA08G0176500 I 0.000
ORGLA09G0114000 Oryza glaberrima ORGLA09G0114000 I 0.000
ORUFI03G41710 Oryza rufipogon ORUFI03G41710 I 0.000
ORUFI04G22540 Oryza rufipogon ORUFI04G22540 I 0.000
ORUFI07G16070 Oryza rufipogon ORUFI07G16070 I 0.000
ORUFI08G22440 Oryza rufipogon ORUFI08G22440 I 0.000
ORUFI09G15960 Oryza rufipogon ORUFI09G15960 I 0.000
SPL6 Oryza sativa OS03G0833300 I 0.000
SPL7 Oryza sativa OS04G0551500 I 0.000
SPL14 Oryza sativa OS08G0509600 I 0.000
OS09G0491532 Oryza sativa OS09G0491532 I 0.000
PGSC0003DMG400005196 Solanum tuberosum PGSC0003DMG400005196 I 0.000
PGSC0003DMG400011433 Solanum tuberosum PGSC0003DMG400011433 I 0.000
POPTR_0001s40870 Populus trichocarpa POPTR_0001s40870 I 0.000
POPTR_0002s14330 Populus trichocarpa POPTR_0002s14330 I 0.000
POPTR_0002s18970 Populus trichocarpa POPTR_0002s18970 I 0.000
POPTR_0011s11770 Populus trichocarpa POPTR_0011s11770 I 0.000
POPTR_0014s05690 Populus trichocarpa POPTR_0014s05690 I 0.000
POPTR_0014s10960 Populus trichocarpa POPTR_0014s10960 I 0.000
PRUPE_ppa000690mg Prunus persica PRUPE_ppa000690mg I 0.000
PRUPE_ppa000792mg Prunus persica PRUPE_ppa000792mg I 0.000
PRUPE_ppa007056mg Prunus persica PRUPE_ppa007056mg I 0.000
PRUPE_ppa021582mg Prunus persica PRUPE_ppa021582mg I 0.000
PRUPE_ppa023657mg Prunus persica PRUPE_ppa023657mg I 0.000
PRUPE_ppa024285mg Prunus persica PRUPE_ppa024285mg I 0.000
Sb01g002530 Sorghum bicolor Sb01g002530 I 0.000
Sb02g028420 Sorghum bicolor Sb02g028420 I 0.000
Sb07g027740 Sorghum bicolor Sb07g027740 I 0.000
SPL12 Arabidopsis lyrata scaffold_503227.1 I 0.000
SELMODRAFT_437670 Selaginella moellendorffii SELMODRAFT_437670 I 0.000
SELMODRAFT_445524 Selaginella moellendorffii SELMODRAFT_445524 I 0.000
Si013870m.g Setaria italica Si013870m.g I 0.000
Si030195m.g Setaria italica Si030195m.g I 0.000
Si034095m.g Setaria italica Si034095m.g I 0.000
Solyc01g068100.2 Solanum lycopersicum Solyc01g068100.2 I 0.000
Solyc10g078700.1 Solanum lycopersicum Solyc10g078700.1 I 0.000
TCM_004922 Theobroma cacao TCM_004922 I 0.000
TCM_005620 Theobroma cacao TCM_005620 I 0.000
TCM_021482 Theobroma cacao TCM_021482 I 0.000
TCM_024873 Theobroma cacao TCM_024873 I 0.000
TCM_031595 Theobroma cacao TCM_031595 I 0.000
Traes_4AL_5062917C4 Triticum aestivum Traes_4AL_5062917C4 I 0.000
Traes_5BL_3503725F1 Triticum aestivum Traes_5BL_3503725F1 I 0.000
Traes_5BL_96D5EA4EE Triticum aestivum Traes_5BL_96D5EA4EE I 0.000
Traes_5DL_3CDCC5DFF Triticum aestivum Traes_5DL_3CDCC5DFF I 0.000
TRIUR3_23872 Triticum urartu TRIUR3_23872 I 0.000
TRIUR3_33729 Triticum urartu TRIUR3_33729 I 0.000
VIT_05s0020g00700 Vitis vinifera VIT_05s0020g00700 I 0.000
VIT_07s0005g02260 Vitis vinifera VIT_07s0005g02260 I 0.000
VIT_08s0007g06270 Vitis vinifera VIT_08s0007g06270 I 0.000
VIT_15s0021g02290 Vitis vinifera VIT_15s0021g02290 I 0.000
VIT_18s0122g00380 Vitis vinifera VIT_18s0122g00380 I 0.000
Ca_03548 Cicer arietinum Ca_03548 I 0.000
Ca_07299 Cicer arietinum Ca_07299 I 0.000
Ca_10879 Cicer arietinum Ca_10879 I 0.000
Ca_16243 Cicer arietinum Ca_16243 I 0.000
Ca_24655 Cicer arietinum Ca_24655 I 0.000
Cla021411 Citrullus lanatus Cla021411 I 0.000
Pm002693 Prunus mume Pm002693 I 0.000
Pm007035 Prunus mume Pm007035 I 0.000
Pm008474 Prunus mume Pm008474 I 0.000
Pm008475 Prunus mume Pm008475 I 0.000
Pm017778 Prunus mume Pm017778 I 0.000
28211.m000132 Ricinus communis 28211.m000132 I 0.000
29269.m000250 Ricinus communis 29269.m000250 I 0.000
29889.m003388 Ricinus communis 29889.m003388 I 0.000
30076.m004574 Ricinus communis 30076.m004574 I 0.000
30174.m008805 Ricinus communis 30174.m008805 I 0.000
cassava17741.valid.m1 Manihot esculenta cassava17741.valid.m1 I 0.000
cassava29736.valid.m1 Manihot esculenta cassava29736.valid.m1 I 0.000
cassava36085.valid.m1 Manihot esculenta cassava36085.valid.m1 I 0.000
cassava37839.valid.m1 Manihot esculenta cassava37839.valid.m1 I 0.000
Cucsa.242790 Cucumis sativus Cucsa.242790 I 0.000
estExt_fgenesh1_pg.C_1940032 Physcomitrella patens estExt_fgenesh1_pg.C_1940032 I 0.000
fgenesh1_pg.scaffold_50000083 Physcomitrella patens fgenesh1_pg.scaffold_50000083 I 0.000
mgf001202m Mimulus guttatus mgf001202m I 0.000
mgf001295m Mimulus guttatus mgf001295m I 0.000
mgf009459m Mimulus guttatus mgf009459m I 0.000
mgf012995m Mimulus guttatus mgf012995m I 0.000
mgf025134m Mimulus guttatus mgf025134m I 0.000
Aquca_009_00161 Aquilegia coerulea Aquca_009_00161 I 0.000
Aquca_029_00063 Aquilegia coerulea Aquca_029_00063 I 0.000
Bostr.25993s0059 Boechera stricta Bostr.25993s0059 I 0.000
Bostr.25993s0559 Boechera stricta Bostr.25993s0559 I 0.000
Bostr.29344s0010 Boechera stricta Bostr.29344s0010 I 0.000
Cagra.16630s0008 Capsella grandiflora Cagra.16630s0008 I 0.000
Cagra.3527s0045 Capsella grandiflora Cagra.3527s0045 I 0.000
Carubv10016658m.g Capsella rubella Carubv10016658m.g I 0.000
Ciclev10004227m.g Citrus clementina Ciclev10004227m.g I 0.000
Ciclev10009879m.g Citrus clementina Ciclev10009879m.g I 0.000
Ciclev10011938m.g Citrus clementina Ciclev10011938m.g I 0.000
Ciclev10016841m.g Citrus clementina Ciclev10016841m.g I 0.000
Ciclev10018697m.g Citrus clementina Ciclev10018697m.g I 0.000
Ciclev10031270m.g Citrus clementina Ciclev10031270m.g I 0.000
Eucgr.A01019 Eucalyptus grandis Eucgr.A01019 I 0.000
Eucgr.A02441 Eucalyptus grandis Eucgr.A02441 I 0.000
Eucgr.H04114 Eucalyptus grandis Eucgr.H04114 I 0.000
Eucgr.K01828 Eucalyptus grandis Eucgr.K01828 I 0.000
evm.TU.supercontig_146.32 Carica papaya evm.TU.supercontig_146.32 I 0.000
evm.TU.supercontig_149.2 Carica papaya evm.TU.supercontig_149.2 I 0.000
evm.TU.supercontig_80.88 Carica papaya evm.TU.supercontig_80.88 I 0.000
gene22660-v1.0-hybrid Fragaria vesca gene22660-v1.0-hybrid I 0.000
gene22889-v1.0-hybrid Fragaria vesca gene22889-v1.0-hybrid I 0.000
Gorai.002G156700 Gossypium raimondii Gorai.002G156700 I 0.000
Gorai.006G066700 Gossypium raimondii Gorai.006G066700 I 0.000
Gorai.007G087900 Gossypium raimondii Gorai.007G087900 I 0.000
Gorai.007G116100 Gossypium raimondii Gorai.007G116100 I 0.000
Gorai.007G362000 Gossypium raimondii Gorai.007G362000 I 0.000
Gorai.008G135700 Gossypium raimondii Gorai.008G135700 I 0.000
Gorai.013G169800 Gossypium raimondii Gorai.013G169800 I 0.000
Lus10004523.g Linum usitatissimum Lus10004523.g I 0.000
Lus10010071.g Linum usitatissimum Lus10010071.g I 0.000
Lus10012020.g Linum usitatissimum Lus10012020.g I 0.000
Lus10016275.g Linum usitatissimum Lus10016275.g I 0.000
Lus10021034.g Linum usitatissimum Lus10021034.g I 0.000
Lus10023818.g Linum usitatissimum Lus10023818.g I 0.000
MDP0000156994 Malus domestica MDP0000156994 I 0.000
MDP0000180408 Malus domestica MDP0000180408 I 0.000
MDP0000180409 Malus domestica MDP0000180409 I 0.000
MDP0000262141 Malus domestica MDP0000262141 I 0.000
MDP0000297978 Malus domestica MDP0000297978 I 0.000
MDP0000589558 Malus domestica MDP0000589558 I 0.000
MDP0000861601 Malus domestica MDP0000861601 I 0.000
MDP0000919693 Malus domestica MDP0000919693 I 0.000
MDP0000919694 Malus domestica MDP0000919694 I 0.000
orange1.1g001971m.g Citrus sinensis orange1.1g001971m.g I 0.000
orange1.1g009653m.g Citrus sinensis orange1.1g009653m.g I 0.000
orange1.1g029650m.g Citrus sinensis orange1.1g029650m.g I 0.000
orange1.1g032937m.g Citrus sinensis orange1.1g032937m.g I 0.000
orange1.1g046416m.g Citrus sinensis orange1.1g046416m.g I 0.000
Pavir.Ba01711 Panicum virgatum Pavir.Ba01711 I 0.000
Pavir.Fb01946 Panicum virgatum Pavir.Fb01946 I 0.000
Pavir.Ia00235 Panicum virgatum Pavir.Ia00235 I 0.000
Pavir.J01500 Panicum virgatum Pavir.J01500 I 0.000
Pavir.J11258 Panicum virgatum Pavir.J11258 I 0.000
SapurV1A.0014s0380 Salix purpurea SapurV1A.0014s0380 I 0.000
SapurV1A.0018s0470 Salix purpurea SapurV1A.0018s0470 I 0.000
SapurV1A.0033s0320 Salix purpurea SapurV1A.0033s0320 I 0.000
SapurV1A.0156s0200 Salix purpurea SapurV1A.0156s0200 I 0.000
SapurV1A.0294s0270 Salix purpurea SapurV1A.0294s0270 I 0.000
SapurV1A.1264s0060 Salix purpurea SapurV1A.1264s0060 I 0.000
Thhalv10001295m.g Eutrema salsugineum Thhalv10001295m.g I 0.000
PK11310.1 Cannabis sativa PK11310.1 I 0.000
PK18312.1 Cannabis sativa PK18312.1 I 0.000
chr1.CM0122.330.nc Lotus japonicus chr1.CM0122.330.nc I 0.000
chr3.CM0282.980.nc Lotus japonicus chr3.CM0282.980.nc I 0.000
chr5.CM0158.110.nc Lotus japonicus chr5.CM0158.110.nc I 0.000
GRMZM2G460544 Zea mays GRMZM2G460544 N 0.000
OB09G21350 Oryza brachyantha OB09G21350 N 0.000
OBART08G20010 Oryza barthii OBART08G20010 N 0.000
OLONG_015903 Oryza longistaminata OLONG_015903 N 0.000
OLONG_020138 Oryza longistaminata OLONG_020138 N 0.000
Traes_7DS_E2A582546 Triticum aestivum Traes_7DS_E2A582546 N 0.000