BRADI3G37544 (Brachypodium distachyon)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 BRADI3G37544 T001332_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ERF017
M06568_2.00 		Arabidopsis thaliana
NHNYCRCCGWCMWH
DWKGWCGGYGRNDN		 Dap-seq
OMalley et al.(2016)
At1g19210_col_a 		0.682 0.780
ERF017
M06569_2.00 		Arabidopsis thaliana
NNNHNNCRCCGWCMW
WKGWCGGYGNNDNNN		 Dap-seq
OMalley et al.(2016)
At1g19210_colamp_a 		0.682 0.780
ERF018
M00842_2.00 		Arabidopsis thaliana
HRCCGDCMN
NKGHCGGYD		 PBM
Franco-Zorrilla et al.(2014)
ORA47 		0.681 0.760
ERF018
M01610_2.00 		Arabidopsis thaliana
NRCCGNCHN
NDGNCGGYN		 PBM
Weirauch et al.(2014)
pTH7215 		0.681 0.760
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BRADI3G37544.1 AP2 14 65

Links

Other AP2 family TFs
Other Brachypodium distachyon TFs

87 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ERF018 Arabidopsis thaliana AT1G74930 D 0.681
ERF017 Arabidopsis thaliana AT1G19210 D 0.682
Ciclev10010348m.g Citrus clementina Ciclev10010348m.g I 0.689
TCM_037415 Theobroma cacao TCM_037415 I 0.691
Carubv10011394m.g Capsella rubella Carubv10011394m.g I 0.682
Cagra.1961s0079 Capsella grandiflora Cagra.1961s0079 I 0.682
Bostr.3288s0141 Boechera stricta Bostr.3288s0141 I 0.681
Aquca_076_00039 Aquilegia coerulea Aquca_076_00039 I 0.690
mgf024162m Mimulus guttatus mgf024162m I 0.677
Cucsa.141980 Cucumis sativus Cucsa.141980 I 0.700
cassava25057.valid.m1 Manihot esculenta cassava25057.valid.m1 I 0.691
cassava20547.m1 Manihot esculenta cassava20547.m1 I 0.685
cassava10604.m1 Manihot esculenta cassava10604.m1 I 0.677
29739.m003716 Ricinus communis 29739.m003716 I 0.690
Pm027117 Prunus mume Pm027117 I 0.690
Cla011318 Citrullus lanatus Cla011318 I 0.700
Ca_01683 Cicer arietinum Ca_01683 I 0.679
VIT_11s0016g00660 Vitis vinifera VIT_11s0016g00660 I 0.688
ORA47 Vitis vinifera VIT_04s0008g02230 I 0.680
Traes_6DL_FA861D610 Triticum aestivum Traes_6DL_FA861D610 I 0.697
TRAES3BF084200010CFD_g Triticum aestivum TRAES3BF084200010CFD_g I 0.790
TCM_037486 Theobroma cacao TCM_037486 I 0.690
Thhalv10009812m.g Eutrema salsugineum Thhalv10009812m.g I 0.681
Lus10034885.g Linum usitatissimum Lus10034885.g I 0.684
SapurV1A.2229s0010 Salix purpurea SapurV1A.2229s0010 I 0.684
SapurV1A.0521s0050 Salix purpurea SapurV1A.0521s0050 I 0.682
SapurV1A.0373s0040 Salix purpurea SapurV1A.0373s0040 I 0.684
SapurV1A.0057s0300 Salix purpurea SapurV1A.0057s0300 I 0.678
Pavir.J00593 Panicum virgatum Pavir.J00593 I 0.698
Pavir.Fb01602 Panicum virgatum Pavir.Fb01602 I 0.800
Pavir.Fa00741 Panicum virgatum Pavir.Fa00741 I 0.800
Pavir.Aa00296 Panicum virgatum Pavir.Aa00296 I 0.696
MDP0000649022 Malus domestica MDP0000649022 I 0.679
Lus10038082.g Linum usitatissimum Lus10038082.g I 0.690
Eucgr.C00780 Eucalyptus grandis Eucgr.C00780 I 0.691
Lus10033420.g Linum usitatissimum Lus10033420.g I 0.684
Lus10009798.g Linum usitatissimum Lus10009798.g I 0.690
Gorai.010G091100 Gossypium raimondii Gorai.010G091100 I 0.700
Gorai.004G285900 Gossypium raimondii Gorai.004G285900 I 0.682
Gorai.001G019100 Gossypium raimondii Gorai.001G019100 I 0.693
gene12919-v1.0-hybrid Fragaria vesca gene12919-v1.0-hybrid I 0.680
evm.TU.supercontig_266.5 Carica papaya evm.TU.supercontig_266.5 I 0.679
Eucgr.C03297 Eucalyptus grandis Eucgr.C03297 I 0.677
Eucgr.C03175 Eucalyptus grandis Eucgr.C03175 I 0.743
GLYMA04G06095 Glycine max GLYMA04G06095 I 0.679
OB08G24280 Oryza brachyantha OB08G24280 I 0.800
MTR_3g105510 Medicago truncatula MTR_3g105510 I 0.735
MTR_3g105480 Medicago truncatula MTR_3g105480 I 0.735
LPERR08G14000 Leersia perrieri LPERR08G14000 I 0.800
GSMUA_AchrUn_randomG02200_001 Musa acuminata GSMUA_AchrUn_randomG02200_001 I 0.680
GSMUA_Achr9G14360_001 Musa acuminata GSMUA_Achr9G14360_001 I 0.742
GSMUA_Achr5G05160_001 Musa acuminata GSMUA_Achr5G05160_001 I 0.733
GRMZM2G163745 Zea mays GRMZM2G163745 I 0.800
GRMZM2G097081 Zea mays GRMZM2G097081 I 0.691
GLYMA06G06101 Glycine max GLYMA06G06101 I 0.679
OBART06G06190 Oryza barthii OBART06G06190 I 0.689
ORA47 Arabidopsis lyrata fgenesh2_kg.2__1761__AT1G74930.1 I 0.681
fgenesh2_kg.1__2098__AT1G19210.1 Arabidopsis lyrata fgenesh2_kg.1__2098__AT1G19210.1 I 0.682
F775_23111 Aegilops tauschii F775_23111 I 0.788
Bra031069 Brassica rapa Bra031069 I 0.685
Bra016518 Brassica rapa Bra016518 I 0.696
Bo8g102870 Brassica oleracea Bo8g102870 I 0.685
Bo8g068370 Brassica oleracea Bo8g068370 I 0.696
Bo6g119120 Brassica oleracea Bo6g119120 I 0.677
BGIOSGA028781 Oryza indica BGIOSGA028781 I 0.800
BGIOSGA022471 Oryza indica BGIOSGA022471 I 0.687
ORUFI08G18850 Oryza rufipogon ORUFI08G18850 I 0.800
Si019636m.g Setaria italica Si019636m.g I 0.696
Si015027m.g Setaria italica Si015027m.g I 0.800
Si008104m.g Setaria italica Si008104m.g I 0.730
Sb07g022265 Sorghum bicolor Sb07g022265 I 0.755
PRUPE_ppa011336mg Prunus persica PRUPE_ppa011336mg I 0.690
POPTR_0006s23480 Populus trichocarpa POPTR_0006s23480 I 0.684
POPTR_0006s14100 Populus trichocarpa POPTR_0006s14100 I 0.691
POPTR_0006s14090 Populus trichocarpa POPTR_0006s14090 I 0.691
PGSC0003DMG400030781 Solanum tuberosum PGSC0003DMG400030781 I 0.727
OS08G0454000 Oryza sativa OS08G0454000 I 0.800
Solyc06g054630.1 Solanum lycopersicum Solyc06g054630.1 I 0.727
ORUFI06G06480 Oryza rufipogon ORUFI06G06480 I 0.687
ORGLA06G0057200 Oryza glaberrima ORGLA06G0057200 I 0.689
OPUNC08G14840 Oryza punctata OPUNC08G14840 I 0.800
ONIVA08G18470 Oryza nivara ONIVA08G18470 I 0.800
ONIVA06G07190 Oryza nivara ONIVA06G07190 I 0.689
OMERI03G32210 Oryza meridionalis OMERI03G32210 I 0.689
OGLUM08G17690 Oryza glumaepatula OGLUM08G17690 I 0.800
OGLUM06G06520 Oryza glumaepatula OGLUM06G06520 I 0.689
OBART08G16950 Oryza barthii OBART08G16950 I 0.800