BRADI5G21250 (Brachypodium distachyon)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 BRADI5G21250 T001379_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAP2-6
M00717_2.00 		Arabidopsis thaliana
NBGCYGNH
DNCRGCVN		 PBM
Chang et al.(2013)
pTH7225 		0.728 0.755
RAP2-6
M00841_2.00 		Arabidopsis thaliana
NGCCGHHNNN
NNNDDCGGCN		 PBM
Franco-Zorrilla et al.(2014)
RAP2.6 		0.728 0.755
RAP2-6
M06579_2.00 		Arabidopsis thaliana
HHDYCKCCGCCGYMD
HKRCGGCGGMGRHDD		 Dap-seq
OMalley et al.(2016)
RAP26_col_a 		0.728 0.755
RAP2-6
M06580_2.00 		Arabidopsis thaliana
CGCCGY
RCGGCG		 Dap-seq
OMalley et al.(2016)
RAP26_colamp_a 		0.728 0.755
ERF115
M06657_2.00 		Arabidopsis thaliana
CCGCCGYMRYHDCCR
YGGHDRYKRCGGCGG		 Dap-seq
OMalley et al.(2016)
ERF115_col_a 		0.705 0.714
ERF115
M06658_2.00 		Arabidopsis thaliana
CKCCGCCGYMRYHDY
RHDRYKRCGGCGGMG		 Dap-seq
OMalley et al.(2016)
ERF115_colamp_a 		0.705 0.714
ERF8
M01608_2.00 		Arabidopsis thaliana
MGCCGNMNNN
NNNKNCGGCK		 PBM
Weirauch et al.(2014)
pTH8095 		0.697 0.796
ERF8
M06586_2.00 		Arabidopsis thaliana
NYHDYCKCCGCCGYH
DRCGGCGGMGRHDRN		 Dap-seq
OMalley et al.(2016)
ERF8_col_a 		0.697 0.796
ERF8
M06587_2.00 		Arabidopsis thaliana
HNNHDSCGCCGYCRHHDN
NHDDYGRCGGCGSHDNND		 Dap-seq
OMalley et al.(2016)
ERF8_colamp_a 		0.697 0.796
ERF4
M01616_2.00 		Arabidopsis thaliana
VCGCCGCC
GGCGGCGB		 PBM
Weirauch et al.(2014)
pTH8156 		0.693 0.796
ERF4
M06616_2.00 		Arabidopsis thaliana
YCDCCGCCGCCRHHD
HDDYGGCGGCGGHGR		 Dap-seq
OMalley et al.(2016)
ERF4_col_a 		0.693 0.796
ERF4
M06617_2.00 		Arabidopsis thaliana
NHNNHNSCGCCGYCRHHDNN
NNHDDYGRCGGCGSNDNNDN		 Dap-seq
OMalley et al.(2016)
ERF4_colamp_a 		0.693 0.796
ERF094
M01602_2.00 		Arabidopsis thaliana
VGCCGCCD
HGGCGGCB		 PBM
Weirauch et al.(2014)
pTH8276 		0.693 0.694
ERF4_TOBAC
M09728_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF3_02 		0.687 0.776
PK19363.1
M01100_2.00 		Cannabis sativa
NMGCCGHMNN
NNKDCGGCKN		 PBM
Lambert et al.(2019)
pTH10138 		0.681 0.755
PK19363.1
M01643_2.00 		Cannabis sativa
CGCCGYCD
HGRCGGCG		 PBM
Weirauch et al.(2014)
pTH9609 		0.681 0.755
ERF9
M06670_2.00 		Arabidopsis thaliana
YCDCCGCCGYCDHHDYHDYHN
NDRHDRHDDHGRCGGCGGHGR		 Dap-seq
OMalley et al.(2016)
ERF9_col_a 		0.681 0.796
ERF9
M06671_2.00 		Arabidopsis thaliana
NNHDSCGCCGYCRHWDN
NHWDYGRCGGCGSHDNN		 Dap-seq
OMalley et al.(2016)
ERF9_colamp_a 		0.681 0.796
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
BRADI5G21250.1 AP2 20 71

Links

Other AP2 family TFs
Other Brachypodium distachyon TFs

571 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TVAG_511900 Trichomonas vaginalis TVAG_511900 I
TVAG_315700 Trichomonas vaginalis TVAG_315700 I
TVAG_320670 Trichomonas vaginalis TVAG_320670 I
TVAG_384340 Trichomonas vaginalis TVAG_384340 I
TVAG_398170 Trichomonas vaginalis TVAG_398170 I
TVAG_418370 Trichomonas vaginalis TVAG_418370 I
TVAG_422850 Trichomonas vaginalis TVAG_422850 I
TVAG_428400 Trichomonas vaginalis TVAG_428400 I
TVAG_431290 Trichomonas vaginalis TVAG_431290 I
TVAG_446510 Trichomonas vaginalis TVAG_446510 I
TVAG_464320 Trichomonas vaginalis TVAG_464320 I
TVAG_466400 Trichomonas vaginalis TVAG_466400 I
TVAG_469670 Trichomonas vaginalis TVAG_469670 I
TVAG_485740 Trichomonas vaginalis TVAG_485740 I
TVAG_492320 Trichomonas vaginalis TVAG_492320 I
TVAG_500220 Trichomonas vaginalis TVAG_500220 I
TVAG_356580 Trichomonas vaginalis TVAG_356580 I
TVAG_514140 Trichomonas vaginalis TVAG_514140 I
TVAG_518010 Trichomonas vaginalis TVAG_518010 I
TVAG_525230 Trichomonas vaginalis TVAG_525230 I
TVAG_528950 Trichomonas vaginalis TVAG_528950 I
TVAG_535080 Trichomonas vaginalis TVAG_535080 I
TVAG_535180 Trichomonas vaginalis TVAG_535180 I
TVAG_555690 Trichomonas vaginalis TVAG_555690 I
TVAG_556150 Trichomonas vaginalis TVAG_556150 I
TVAG_563060 Trichomonas vaginalis TVAG_563060 I
TVAG_563360 Trichomonas vaginalis TVAG_563360 I
TVAG_566490 Trichomonas vaginalis TVAG_566490 I
TVAG_578750 Trichomonas vaginalis TVAG_578750 I
TVAG_579860 Trichomonas vaginalis TVAG_579860 I
TVAG_590210 Trichomonas vaginalis TVAG_590210 I
TVAG_597870 Trichomonas vaginalis TVAG_597870 I
TVAG_200950 Trichomonas vaginalis TVAG_200950 I
TVAG_085400 Trichomonas vaginalis TVAG_085400 I
TVAG_105110 Trichomonas vaginalis TVAG_105110 I
TVAG_106110 Trichomonas vaginalis TVAG_106110 I
TVAG_050010 Trichomonas vaginalis TVAG_050010 I
TVAG_048830 Trichomonas vaginalis TVAG_048830 I
TVAG_170760 Trichomonas vaginalis TVAG_170760 I
TVAG_187200 Trichomonas vaginalis TVAG_187200 I
TVAG_194980 Trichomonas vaginalis TVAG_194980 I
TVAG_203550 Trichomonas vaginalis TVAG_203550 I
TVAG_208090 Trichomonas vaginalis TVAG_208090 I
TVAG_208170 Trichomonas vaginalis TVAG_208170 I
TVAG_213270 Trichomonas vaginalis TVAG_213270 I
TVAG_242410 Trichomonas vaginalis TVAG_242410 I
TVAG_255490 Trichomonas vaginalis TVAG_255490 I
TVAG_041220 Trichomonas vaginalis TVAG_041220 I
TVAG_287680 Trichomonas vaginalis TVAG_287680 I
TVAG_030320 Trichomonas vaginalis TVAG_030320 I
TVAG_315670 Trichomonas vaginalis TVAG_315670 I
TVAG_312030 Trichomonas vaginalis TVAG_312030 I
TVAG_048500 Trichomonas vaginalis TVAG_048500 N
TVAG_022950 Trichomonas vaginalis TVAG_022950 N
TVAG_574680 Trichomonas vaginalis TVAG_574680 N
TVAG_072910 Trichomonas vaginalis TVAG_072910 N
TVAG_557940 Trichomonas vaginalis TVAG_557940 N
TVAG_079810 Trichomonas vaginalis TVAG_079810 N
TVAG_552140 Trichomonas vaginalis TVAG_552140 N
TVAG_544250 Trichomonas vaginalis TVAG_544250 N
TVAG_123330 Trichomonas vaginalis TVAG_123330 N
TVAG_141650 Trichomonas vaginalis TVAG_141650 N
TVAG_162250 Trichomonas vaginalis TVAG_162250 N
TVAG_167420 Trichomonas vaginalis TVAG_167420 N
TVAG_197590 Trichomonas vaginalis TVAG_197590 N
TVAG_207810 Trichomonas vaginalis TVAG_207810 N
TVAG_261460 Trichomonas vaginalis TVAG_261460 N
TVAG_362070 Trichomonas vaginalis TVAG_362070 N
TVAG_008200 Trichomonas vaginalis TVAG_008200 N