GSMUA_Achr6G13340_001 (Musa acuminata)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 GSMUA_Achr6G13340_001 T002425_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DREB1B
M06643_2.00 		Arabidopsis thaliana
DHBRCCGACRHN
NDYGTCGGYVDH		 Dap-seq
OMalley et al.(2016)
CBF1_col_a 		0.685 0.800
DREB1B
M06644_2.00 		Arabidopsis thaliana
NNNHBRCCGACAWNN
NNWTGTCGGYVDNNN		 Dap-seq
OMalley et al.(2016)
CBF1_colamp_a 		0.685 0.800
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr6P13340_001 AP2 45 96

Links

Other AP2 family TFs
Other Musa acuminata TFs

5 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
DREB1B Arabidopsis thaliana AT4G25490 D 0.685
GSMUA_Achr10G15510_001 Musa acuminata GSMUA_Achr10G15510_001 I 0.707
GSMUA_Achr2G20280_001 Musa acuminata GSMUA_Achr2G20280_001 I 0.678
Cagra.2248s0025 Capsella grandiflora Cagra.2248s0025 I 0.683
Carubv10006809m.g Capsella rubella Carubv10006809m.g I 0.682