OPUNC09G06680 (Oryza punctata)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 OPUNC09G06680 T003806_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAP2-4
M01612_2.00 		Arabidopsis thaliana
NRCCGHCMNN
NNKGDCGGYN		 PBM
Weirauch et al.(2014)
pTH8092 		0.851 0.960
ERF055
M06577_2.00 		Arabidopsis thaliana
NHDYCACCGHCMHH
DDKGDCGGTGRHDN		 Dap-seq
OMalley et al.(2016)
At1g36060_col_a 		0.838 0.940
ERF055
M06578_2.00 		Arabidopsis thaliana
NHDYCACCGHCMHH
DDKGDCGGTGRHDN		 Dap-seq
OMalley et al.(2016)
At1g36060_colamp_a 		0.838 0.940
AT5G65130
M06686_2.00 		Arabidopsis thaliana
YCDYCDCCRCCGCCN
NGGCGGYGGHGRHGR		 Dap-seq
OMalley et al.(2016)
At5g65130_col_a 		0.722 0.860
AT5G65130
M06687_2.00 		Arabidopsis thaliana
NNNNHNNHDSCRCCGMCMW
WKGKCGGYGSHDNNDNNNN		 Dap-seq
OMalley et al.(2016)
At5g65130_colamp_a 		0.722 0.860
WIN1
M01603_2.00 		Arabidopsis thaliana
VCRCCGCNNN
NNNGCGGYGB		 PBM
Weirauch et al.(2014)
pTH7566 		0.685 0.660
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
OPUNC09G06680.1 AP2 103 154

Links

Other AP2 family TFs
Other Oryza punctata TFs

449 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
F443_10259 Phytophthora parasitica F443_10259 N 0.000
HpaG811532 Hyaloperonospora arabidopsidis HpaG811532 N 0.000
maker-pag1_scaffold_15-fgenesh-gene-1.10 Pythium aphanidermatum maker-pag1_scaffold_15-fgenesh-gene-1.10 N 0.000
maker-pve_contig_516-snap-gene-0.15 Pythium vexans maker-pve_contig_516-snap-gene-0.15 N 0.000
Phyra75827 Phytophthora ramorum Phyra75827 N 0.000
Physo141839 Phytophthora sojae Physo141839 N 0.000
PITG_09522 Phytophthora infestans PITG_09522 N 0.000
PITG_09630 Phytophthora infestans PITG_09630 N 0.000
PYU1_G013091 Pythium ultimum PYU1_G013091 N 0.000