PGSC0003DMG400034739 (Solanum tuberosum)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 PGSC0003DMG400034739 T004494_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
abi4
M02648_2.00 		Zea mays
CGSYGCYBYB
VRVRGCRSCG		 SELEX
Mathelier et al.(2014)
MA0123.1 		0.793 0.900
abi4
M09706_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ABI4_01 		0.793 0.900
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400085168 AP2 45 96

Links

Other AP2 family TFs
Other Solanum tuberosum TFs

57 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
estExt_fgenesh2_pg.C_750143 Branchiostoma floridae estExt_fgenesh2_pg.C_750143 N
fgenesh2_pg.scaffold_72000003 Branchiostoma floridae fgenesh2_pg.scaffold_72000003 N
fgenesh2_pg.scaffold_624000032 Branchiostoma floridae fgenesh2_pg.scaffold_624000032 N
fgenesh2_pg.scaffold_58000023 Branchiostoma floridae fgenesh2_pg.scaffold_58000023 N
fgenesh2_pg.scaffold_55000124 Branchiostoma floridae fgenesh2_pg.scaffold_55000124 N
fgenesh2_pg.scaffold_55000119 Branchiostoma floridae fgenesh2_pg.scaffold_55000119 N
fgenesh2_pg.scaffold_440000023 Branchiostoma floridae fgenesh2_pg.scaffold_440000023 N
fgenesh2_pg.scaffold_354000015 Branchiostoma floridae fgenesh2_pg.scaffold_354000015 N
fgenesh2_pg.scaffold_354000013 Branchiostoma floridae fgenesh2_pg.scaffold_354000013 N
fgenesh2_pg.scaffold_32000086 Branchiostoma floridae fgenesh2_pg.scaffold_32000086 N
fgenesh2_pg.scaffold_32000031 Branchiostoma floridae fgenesh2_pg.scaffold_32000031 N
fgenesh2_pg.scaffold_308000052 Branchiostoma floridae fgenesh2_pg.scaffold_308000052 N
fgenesh2_pg.scaffold_268000051 Branchiostoma floridae fgenesh2_pg.scaffold_268000051 N
fgenesh2_pg.scaffold_1639000001 Branchiostoma floridae fgenesh2_pg.scaffold_1639000001 N
estExt_fgenesh2_pg.C_10050001 Branchiostoma floridae estExt_fgenesh2_pg.C_10050001 N
estExt_fgenesh2_pg.C_7360007 Branchiostoma floridae estExt_fgenesh2_pg.C_7360007 N
estExt_fgenesh2_pg.C_7160018 Branchiostoma floridae estExt_fgenesh2_pg.C_7160018 N
estExt_fgenesh2_pg.C_5860001 Branchiostoma floridae estExt_fgenesh2_pg.C_5860001 N
estExt_fgenesh2_pg.C_5580012 Branchiostoma floridae estExt_fgenesh2_pg.C_5580012 N
estExt_fgenesh2_pg.C_520015 Branchiostoma floridae estExt_fgenesh2_pg.C_520015 N
estExt_fgenesh2_pg.C_460129 Branchiostoma floridae estExt_fgenesh2_pg.C_460129 N
estExt_fgenesh2_pg.C_2150032 Branchiostoma floridae estExt_fgenesh2_pg.C_2150032 N
estExt_fgenesh2_pg.C_160025 Branchiostoma floridae estExt_fgenesh2_pg.C_160025 N
estExt_fgenesh2_pg.C_1360008 Branchiostoma floridae estExt_fgenesh2_pg.C_1360008 N
estExt_fgenesh2_pg.C_1010105 Branchiostoma floridae estExt_fgenesh2_pg.C_1010105 N
estExt_fgenesh2_pg.C_10050003 Branchiostoma floridae estExt_fgenesh2_pg.C_10050003 N
estExt_fgenesh2_pg.C_10050002 Branchiostoma floridae estExt_fgenesh2_pg.C_10050002 N