POPTR_0006s13460 (Populus trichocarpa)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 POPTR_0006s13460 T004654_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Q9XHD4_PETHY
M09737_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AP2A_01 		0.854 0.949
Q9XHD3_PETHY
M09736_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AP2B_01 		0.840 0.949
RAP2.7
M00845_2.00 		Arabidopsis thaliana
KRCGRGGD
HCCYCGYM		 PBM
Franco-Zorrilla et al.(2014)
TOE1 		0.839 0.959
P93632_MAIZE
M09712_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GL15_01 		0.817 0.847
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0006s13460.1 AP2 162 211
POPTR_0006s13460.1 AP2 254 305

Links

Other AP2 family TFs
Other Populus trichocarpa TFs

241 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
LOC_Os05g36160 Oryza sativa LOC_Os05g36160 D 0.000
Sb03g040970 Sorghum bicolor Sb03g040970 I 0.000
ONIVA01G43200 Oryza nivara ONIVA01G43200 I 0.000
ONIVA05G18780 Oryza nivara ONIVA05G18780 I 0.000
OPUNC01G37310 Oryza punctata OPUNC01G37310 I 0.000
OPUNC05G15820 Oryza punctata OPUNC05G15820 I 0.000
ORGLA05G0154900 Oryza glaberrima ORGLA05G0154900 I 0.000
ORUFI01G41890 Oryza rufipogon ORUFI01G41890 I 0.000
ORUFI05G19090 Oryza rufipogon ORUFI05G19090 I 0.000
OS01G0867300 Oryza sativa OS01G0867300 I 0.000
OS05G0437700 Oryza sativa OS05G0437700 I 0.000
BGIOSGA019930 Oryza indica BGIOSGA019930 I 0.000
Si003247m.g Setaria italica Si003247m.g I 0.000
Solyc04g071510.2 Solanum lycopersicum Solyc04g071510.2 I 0.000
TRAES3BF019000220CFD_g Triticum aestivum TRAES3BF019000220CFD_g I 0.000
TRIUR3_19588 Triticum urartu TRIUR3_19588 I 0.000
Cucsa.184670 Cucumis sativus Cucsa.184670 I 0.000
Pavir.Ea03718 Panicum virgatum Pavir.Ea03718 I 0.000
Pavir.J05659 Panicum virgatum Pavir.J05659 I 0.000
OMERI01G35430 Oryza meridionalis OMERI01G35430 I 0.000
BGIOSGA000430 Oryza indica BGIOSGA000430 I 0.000
BRADI2G24120 Brachypodium distachyon BRADI2G24120 I 0.000
BRADI2G56096 Brachypodium distachyon BRADI2G56096 I 0.000
F775_25077 Aegilops tauschii F775_25077 I 0.000
GRMZM5G858197 Zea mays GRMZM5G858197 I 0.000
LPERR01G33060 Leersia perrieri LPERR01G33060 I 0.000
LPERR05G14180 Leersia perrieri LPERR05G14180 I 0.000
MLOC_53321 Hordeum vulgare MLOC_53321 I 0.000
MLOC_64571 Hordeum vulgare MLOC_64571 I 0.000
OB05G25740 Oryza brachyantha OB05G25740 I 0.000
OBART01G38510 Oryza barthii OBART01G38510 I 0.000
OBART05G17920 Oryza barthii OBART05G17920 I 0.000
OGLUM01G42750 Oryza glumaepatula OGLUM01G42750 I 0.000
OGLUM05G18920 Oryza glumaepatula OGLUM05G18920 I 0.000
OLONG_006755 Oryza longistaminata OLONG_006755 I 0.000
OMERI05G15500 Oryza meridionalis OMERI05G15500 I 0.000
Ca_04375 Cicer arietinum Ca_04375 N 0.000
chr5.CM0052.120.nc Lotus japonicus chr5.CM0052.120.nc N 0.000