POPTR_0017s08090 (Populus trichocarpa)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 POPTR_0017s08090 T004740_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK19363.1
M01100_2.00 		Cannabis sativa
NMGCCGHMNN
NNKDCGGCKN		 PBM
Lambert et al.(2019)
pTH10138 		0.683 0.745
PK19363.1
M01643_2.00 		Cannabis sativa
CGCCGYCD
HGRCGGCG		 PBM
Weirauch et al.(2014)
pTH9609 		0.683 0.745
ERF4
M01616_2.00 		Arabidopsis thaliana
VCGCCGCC
GGCGGCGB		 PBM
Weirauch et al.(2014)
pTH8156 		0.678 0.745
ERF4
M06616_2.00 		Arabidopsis thaliana
YCDCCGCCGCCRHHD
HDDYGGCGGCGGHGR		 Dap-seq
OMalley et al.(2016)
ERF4_col_a 		0.678 0.745
ERF4
M06617_2.00 		Arabidopsis thaliana
NHNNHNSCGCCGYCRHHDNN
NNHDDYGRCGGCGSNDNNDN		 Dap-seq
OMalley et al.(2016)
ERF4_colamp_a 		0.678 0.745
ERF9
M06670_2.00 		Arabidopsis thaliana
YCDCCGCCGYCDHHDYHDYHN
NDRHDRHDDHGRCGGCGGHGR		 Dap-seq
OMalley et al.(2016)
ERF9_col_a 		0.677 0.706
ERF9
M06671_2.00 		Arabidopsis thaliana
NNHDSCGCCGYCRHWDN
NHWDYGRCGGCGSHDNN		 Dap-seq
OMalley et al.(2016)
ERF9_colamp_a 		0.677 0.706
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
POPTR_0017s08090.1 AP2 152 203

Links

Other AP2 family TFs
Other Populus trichocarpa TFs

182 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
WRKY63 Arabidopsis thaliana AT1G66600 D 0.000
WRKY70 Arabidopsis thaliana AT3G56400 D 0.000
WRKY38 Arabidopsis thaliana AT5G22570 D 0.000
AMTR_s00077p00103880 Amborella trichopoda AMTR_s00077p00103880 I 0.000
WRKY67 Arabidopsis thaliana AT1G66550 I 0.000
WRKY64 Arabidopsis thaliana AT1G66560 I 0.000
WRKY66 Arabidopsis thaliana AT1G80590 I 0.000
BGIOSGA012571 Oryza indica BGIOSGA012571 I 0.000
Bo01002s040 Brassica oleracea Bo01002s040 I 0.000
Bo2g024040 Brassica oleracea Bo2g024040 I 0.000
Bo3g035130 Brassica oleracea Bo3g035130 I 0.000
Bo3g035140 Brassica oleracea Bo3g035140 I 0.000
Bo4g012750 Brassica oleracea Bo4g012750 I 0.000
Bo4g190390 Brassica oleracea Bo4g190390 I 0.000
Bo6g066790 Brassica oleracea Bo6g066790 I 0.000
Bo6g071110 Brassica oleracea Bo6g071110 I 0.000
Bo8g090820 Brassica oleracea Bo8g090820 I 0.000
Bra000202 Brassica rapa Bra000202 I 0.000
Bra000203 Brassica rapa Bra000203 I 0.000
Bra002421 Brassica rapa Bra002421 I 0.000
Bra003239 Brassica rapa Bra003239 I 0.000
Bra004586 Brassica rapa Bra004586 I 0.000
Bra007243 Brassica rapa Bra007243 I 0.000
Bra016974 Brassica rapa Bra016974 I 0.000
Bra020196 Brassica rapa Bra020196 I 0.000
Bra020197 Brassica rapa Bra020197 I 0.000
Bra028918 Brassica rapa Bra028918 I 0.000
WRKY67 Arabidopsis lyrata fgenesh1_pg.C_scaffold_2000969 I 0.000
WRKY70 Arabidopsis lyrata fgenesh2_kg.5__2072__AT3G56400.1 I 0.000
GLYMA03G00460 Glycine max GLYMA03G00460 I 0.000
GLYMA04G40121 Glycine max GLYMA04G40121 I 0.000
GLYMA04G40130 Glycine max GLYMA04G40130 I 0.000
GLYMA06G14720 Glycine max GLYMA06G14720 I 0.000
GLYMA09G41050 Glycine max GLYMA09G41050 I 0.000
GLYMA13G34240 Glycine max GLYMA13G34240 I 0.000
GLYMA13G34251 Glycine max GLYMA13G34251 I 0.000
GLYMA13G34261 Glycine max GLYMA13G34261 I 0.000
GLYMA13G34281 Glycine max GLYMA13G34281 I 0.000
GLYMA16G34590 Glycine max GLYMA16G34590 I 0.000
GLYMA18G44560 Glycine max GLYMA18G44560 I 0.000
LPERR03G14340 Leersia perrieri LPERR03G14340 I 0.000
LPERR08G11030 Leersia perrieri LPERR08G11030 I 0.000
MTR_0002s1250 Medicago truncatula MTR_0002s1250 I 0.000
MTR_2g075610 Medicago truncatula MTR_2g075610 I 0.000
MTR_2g075680 Medicago truncatula MTR_2g075680 I 0.000
MTR_2g075690 Medicago truncatula MTR_2g075690 I 0.000
MTR_2g075700 Medicago truncatula MTR_2g075700 I 0.000
MTR_2g075750 Medicago truncatula MTR_2g075750 I 0.000
MTR_7g073380 Medicago truncatula MTR_7g073380 I 0.000
MTR_7g073430 Medicago truncatula MTR_7g073430 I 0.000
OB03G26140 Oryza brachyantha OB03G26140 I 0.000
OBART03G16400 Oryza barthii OBART03G16400 I 0.000
OGLUM03G16780 Oryza glumaepatula OGLUM03G16780 I 0.000
OLONG_024544 Oryza longistaminata OLONG_024544 I 0.000
OMERI03G14670 Oryza meridionalis OMERI03G14670 I 0.000
ONIVA03G17390 Oryza nivara ONIVA03G17390 I 0.000
ORUFI03G16960 Oryza rufipogon ORUFI03G16960 I 0.000
OS03G0335200 Oryza sativa OS03G0335200 I 0.000
PGSC0003DMG400008391 Solanum tuberosum PGSC0003DMG400008391 I 0.000
PGSC0003DMG400012160 Solanum tuberosum PGSC0003DMG400012160 I 0.000
PGSC0003DMG400020608 Solanum tuberosum PGSC0003DMG400020608 I 0.000
PGSC0003DMG400027582 Solanum tuberosum PGSC0003DMG400027582 I 0.000
PGSC0003DMG400029207 Solanum tuberosum PGSC0003DMG400029207 I 0.000
POPTR_0006s10950 Populus trichocarpa POPTR_0006s10950 I 0.000
POPTR_0016s14490 Populus trichocarpa POPTR_0016s14490 I 0.000
PRUPE_ppa020736mg Prunus persica PRUPE_ppa020736mg I 0.000
PRUPE_ppa025912mg Prunus persica PRUPE_ppa025912mg I 0.000
PRUPE_ppa026704mg Prunus persica PRUPE_ppa026704mg I 0.000
WRKY38 Arabidopsis lyrata scaffold_602308.1 I 0.000
SELMODRAFT_113487 Selaginella moellendorffii SELMODRAFT_113487 I 0.000
SELMODRAFT_29692 Selaginella moellendorffii SELMODRAFT_29692 I 0.000
Si025181m.g Setaria italica Si025181m.g I 0.000
Si036565m.g Setaria italica Si036565m.g I 0.000
Solyc03g095770.2 Solanum lycopersicum Solyc03g095770.2 I 0.000
Solyc08g082110.2 Solanum lycopersicum Solyc08g082110.2 I 0.000
Solyc09g015770.2 Solanum lycopersicum Solyc09g015770.2 I 0.000
TCM_006116 Theobroma cacao TCM_006116 I 0.000
TCM_019689 Theobroma cacao TCM_019689 I 0.000
VIT_08s0058g01390 Vitis vinifera VIT_08s0058g01390 I 0.000
VIT_13s0067g03140 Vitis vinifera VIT_13s0067g03140 I 0.000
Ca_04100 Cicer arietinum Ca_04100 I 0.000
Ca_09495 Cicer arietinum Ca_09495 I 0.000
Ca_12915 Cicer arietinum Ca_12915 I 0.000
Ca_18932 Cicer arietinum Ca_18932 I 0.000
Cla018337 Citrullus lanatus Cla018337 I 0.000
Pm003013 Prunus mume Pm003013 I 0.000
Pm003014 Prunus mume Pm003014 I 0.000
Pm003015 Prunus mume Pm003015 I 0.000
29729.m002369 Ricinus communis 29729.m002369 I 0.000
29915.m000479 Ricinus communis 29915.m000479 I 0.000
30169.m006533 Ricinus communis 30169.m006533 I 0.000
cassava25180.valid.m1 Manihot esculenta cassava25180.valid.m1 I 0.000
cassava36286.valid.m1 Manihot esculenta cassava36286.valid.m1 I 0.000
cassava43790.valid.m1 Manihot esculenta cassava43790.valid.m1 I 0.000
cassava7221.valid.m1 Manihot esculenta cassava7221.valid.m1 I 0.000
cassava7524.valid.m1 Manihot esculenta cassava7524.valid.m1 I 0.000
cassava7525.valid.m1 Manihot esculenta cassava7525.valid.m1 I 0.000
Cucsa.177060 Cucumis sativus Cucsa.177060 I 0.000
mgf002542m Mimulus guttatus mgf002542m I 0.000
mgf009193m Mimulus guttatus mgf009193m I 0.000
Aquca_013_00135 Aquilegia coerulea Aquca_013_00135 I 0.000
Aquca_027_00037 Aquilegia coerulea Aquca_027_00037 I 0.000
Aquca_030_00182 Aquilegia coerulea Aquca_030_00182 I 0.000
Bostr.20505s0112 Boechera stricta Bostr.20505s0112 I 0.000
Bostr.26527s0018 Boechera stricta Bostr.26527s0018 I 0.000
Bostr.26959s0262 Boechera stricta Bostr.26959s0262 I 0.000
Cagra.15225s0001 Capsella grandiflora Cagra.15225s0001 I 0.000
Cagra.1642s0039 Capsella grandiflora Cagra.1642s0039 I 0.000
Cagra.8153s0001 Capsella grandiflora Cagra.8153s0001 I 0.000
Carubv10002472m.g Capsella rubella Carubv10002472m.g I 0.000
Carubv10017349m.g Capsella rubella Carubv10017349m.g I 0.000
Carubv10021420m.g Capsella rubella Carubv10021420m.g I 0.000
Carubv10024972m.g Capsella rubella Carubv10024972m.g I 0.000
Ciclev10012055m.g Citrus clementina Ciclev10012055m.g I 0.000
Ciclev10032192m.g Citrus clementina Ciclev10032192m.g I 0.000
Ciclev10033384m.g Citrus clementina Ciclev10033384m.g I 0.000
Eucgr.G03144 Eucalyptus grandis Eucgr.G03144 I 0.000
Eucgr.G03145 Eucalyptus grandis Eucgr.G03145 I 0.000
Eucgr.K01289 Eucalyptus grandis Eucgr.K01289 I 0.000
evm.TU.supercontig_19.44 Carica papaya evm.TU.supercontig_19.44 I 0.000
evm.TU.supercontig_86.64 Carica papaya evm.TU.supercontig_86.64 I 0.000
evm.TU.supercontig_86.65 Carica papaya evm.TU.supercontig_86.65 I 0.000
gene13546-v1.0-hybrid Fragaria vesca gene13546-v1.0-hybrid I 0.000
gene13547-v1.0-hybrid Fragaria vesca gene13547-v1.0-hybrid I 0.000
gene13549-v1.0-hybrid Fragaria vesca gene13549-v1.0-hybrid I 0.000
gene13554-v1.0-hybrid Fragaria vesca gene13554-v1.0-hybrid I 0.000
Gorai.005G003900 Gossypium raimondii Gorai.005G003900 I 0.000
Lus10014177.g Linum usitatissimum Lus10014177.g I 0.000
Lus10025133.g Linum usitatissimum Lus10025133.g I 0.000
Lus10025216.g Linum usitatissimum Lus10025216.g I 0.000
Lus10029021.g Linum usitatissimum Lus10029021.g I 0.000
Lus10030517.g Linum usitatissimum Lus10030517.g I 0.000
MDP0000754989 Malus domestica MDP0000754989 I 0.000
orange1.1g018407m.g Citrus sinensis orange1.1g018407m.g I 0.000
orange1.1g020291m.g Citrus sinensis orange1.1g020291m.g I 0.000
orange1.1g021598m.g Citrus sinensis orange1.1g021598m.g I 0.000
Pavir.Ca00459 Panicum virgatum Pavir.Ca00459 I 0.000
Pavir.Ib01568 Panicum virgatum Pavir.Ib01568 I 0.000
Pavir.J05812 Panicum virgatum Pavir.J05812 I 0.000
SapurV1A.0065s0580 Salix purpurea SapurV1A.0065s0580 I 0.000
SapurV1A.0356s0010 Salix purpurea SapurV1A.0356s0010 I 0.000
SapurV1A.0914s0120 Salix purpurea SapurV1A.0914s0120 I 0.000
Thhalv10006146m.g Eutrema salsugineum Thhalv10006146m.g I 0.000
Thhalv10014700m.g Eutrema salsugineum Thhalv10014700m.g I 0.000
Thhalv10015295m.g Eutrema salsugineum Thhalv10015295m.g I 0.000
Thhalv10016713m.g Eutrema salsugineum Thhalv10016713m.g I 0.000
PK03324.1 Cannabis sativa PK03324.1 I 0.000
PDK_20s1519811g002 Phoenix dactylifera PDK_20s1519811g002 I 0.000
MTR_8g032510 Medicago truncatula MTR_8g032510 N 0.000
OB05G27840 Oryza brachyantha OB05G27840 N 0.000
OB11G10740 Oryza brachyantha OB11G10740 N 0.000