SELMODRAFT_15839 (Selaginella moellendorffii)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 SELMODRAFT_15839 T005135_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAP2-4
M01612_2.00 		Arabidopsis thaliana
NRCCGHCMNN
NNKGDCGGYN		 PBM
Weirauch et al.(2014)
pTH8092 		0.815 0.920
ERF055
M06577_2.00 		Arabidopsis thaliana
NHDYCACCGHCMHH
DDKGDCGGTGRHDN		 Dap-seq
OMalley et al.(2016)
At1g36060_col_a 		0.802 0.900
ERF055
M06578_2.00 		Arabidopsis thaliana
NHDYCACCGHCMHH
DDKGDCGGTGRHDN		 Dap-seq
OMalley et al.(2016)
At1g36060_colamp_a 		0.802 0.900
AT5G65130
M06686_2.00 		Arabidopsis thaliana
YCDYCDCCRCCGCCN
NGGCGGYGGHGRHGR		 Dap-seq
OMalley et al.(2016)
At5g65130_col_a 		0.686 0.820
AT5G65130
M06687_2.00 		Arabidopsis thaliana
NNNNHNNHDSCRCCGMCMW
WKGKCGGYGSHDNNDNNNN		 Dap-seq
OMalley et al.(2016)
At5g65130_colamp_a 		0.686 0.820
ERF003
M06667_2.00 		Arabidopsis thaliana
DYCDCCRCCGYMDHHDYHN
NDRHDDHKRCGGYGGHGRH		 Dap-seq
OMalley et al.(2016)
ESE3_col_a 		0.677 0.640
ERF003
M06668_2.00 		Arabidopsis thaliana
HDYCKCCGCCGYHDH
DHDRCGGCGGMGRHD		 Dap-seq
OMalley et al.(2016)
ESE3_colamp_a 		0.677 0.640
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFJ27523 AP2 5 56

Links

Other AP2 family TFs
Other Selaginella moellendorffii TFs

533 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
nhr-232 Caenorhabditis elegans WBGene00012494 D 0.000
L898_g19014 Steinernema monticolum L898_g19014 I 0.000
L889_g8185 Steinernema feltiae L889_g8185 I 0.000
L889_g8187 Steinernema feltiae L889_g8187 I 0.000
L892_g10842 Steinernema scapterisci L892_g10842 I 0.000
CBG09567 Caenorhabditis briggsae CBG09567 I 0.000
L892_g14818 Steinernema scapterisci L892_g14818 I 0.000
L892_g14825 Steinernema scapterisci L892_g14825 I 0.000
L892_g2780 Steinernema scapterisci L892_g2780 I 0.000
L892_g2781 Steinernema scapterisci L892_g2781 I 0.000
L892_g2782 Steinernema scapterisci L892_g2782 I 0.000
L893_g18992 Steinernema glaseri L893_g18992 I 0.000
L893_g18993 Steinernema glaseri L893_g18993 I 0.000
L893_g27930 Steinernema glaseri L893_g27930 I 0.000
L898_g12799 Steinernema monticolum L898_g12799 I 0.000
L898_g19012 Steinernema monticolum L898_g19012 I 0.000
L892_g10843 Steinernema scapterisci L892_g10843 I 0.000
L898_g19019 Steinernema monticolum L898_g19019 I 0.000
L898_g19021 Steinernema monticolum L898_g19021 I 0.000
L898_g20180 Steinernema monticolum L898_g20180 I 0.000
L898_g21763 Steinernema monticolum L898_g21763 I 0.000
L898_g3514 Steinernema monticolum L898_g3514 I 0.000
L898_g3515 Steinernema monticolum L898_g3515 I 0.000
L898_g4012 Steinernema monticolum L898_g4012 I 0.000
L898_g4013 Steinernema monticolum L898_g4013 I 0.000
NBR_0001218401 Nippostrongylus brasiliensis NBR_0001218401 I 0.000
PEQ_0000560101 Parascaris equorum PEQ_0000560101 I 0.000
scaffold31-EXSNAP2012.20 Pristionchus exspectatus scaffold31-EXSNAP2012.20 I 0.000
SVUK_0002058501 Strongylus vulgaris SVUK_0002058501 I 0.000
L596_g14536 Steinernema carpocapsae L596_g14536 I 0.000
CBG15881 Caenorhabditis briggsae CBG15881 I 0.000
CRE05044 Caenorhabditis remanei CRE05044 I 0.000
CRE30948 Caenorhabditis remanei CRE30948 I 0.000
ANCCEY_07914 Ancylostoma ceylanicum ANCCEY_07914 I 0.000
ANCCEY_13226 Ancylostoma ceylanicum ANCCEY_13226 I 0.000
HCOI00483700 Haemonchus contortus HCOI00483700 I 0.000
HCOI01190000 Haemonchus contortus HCOI01190000 I 0.000
HPLM_0000277901 Haemonchus placei HPLM_0000277901 I 0.000
HPLM_0000974301 Haemonchus placei HPLM_0000974301 I 0.000
L596_g14532 Steinernema carpocapsae L596_g14532 I 0.000
L596_g14533 Steinernema carpocapsae L596_g14533 I 0.000
L889_g6804 Steinernema feltiae L889_g6804 I 0.000
L596_g14537 Steinernema carpocapsae L596_g14537 I 0.000
L596_g14588 Steinernema carpocapsae L596_g14588 I 0.000
L596_g14590 Steinernema carpocapsae L596_g14590 I 0.000
L596_g14596 Steinernema carpocapsae L596_g14596 I 0.000
L889_g6692 Steinernema feltiae L889_g6692 I 0.000
L889_g6694 Steinernema feltiae L889_g6694 I 0.000
L889_g6799 Steinernema feltiae L889_g6799 I 0.000
L889_g6798 Steinernema feltiae L889_g6798 I 0.000
L889_g6695 Steinernema feltiae L889_g6695 I 0.000
L889_g6792 Steinernema feltiae L889_g6792 I 0.000
L889_g6797 Steinernema feltiae L889_g6797 I 0.000
L889_g6803 Steinernema feltiae L889_g6803 N 0.000
L893_g27935 Steinernema glaseri L893_g27935 N 0.000
SVE_1003800 Strongyloides venezuelensis SVE_1003800 N 0.000
L892_g10840 Steinernema scapterisci L892_g10840 N 0.000
PTRK_0001404900 Parastrongyloides trichosuri PTRK_0001404900 N 0.000
L898_g4016 Steinernema monticolum L898_g4016 N 0.000
L898_g4015 Steinernema monticolum L898_g4015 N 0.000
L892_g14824 Steinernema scapterisci L892_g14824 N 0.000
L898_g32142 Steinernema monticolum L898_g32142 N 0.000
L898_g2944 Steinernema monticolum L898_g2944 N 0.000
L898_g2943 Steinernema monticolum L898_g2943 N 0.000
L596_g14541 Steinernema carpocapsae L596_g14541 N 0.000
L596_g14578 Steinernema carpocapsae L596_g14578 N 0.000
L893_g27943 Steinernema glaseri L893_g27943 N 0.000