SELMODRAFT_17708 (Selaginella moellendorffii)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 SELMODRAFT_17708 T005142_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAP2-11
M06665_2.00 		Arabidopsis thaliana
NNNYHDYYGCCGBCN
NGVCGGCRRHDRNNN		 Dap-seq
OMalley et al.(2016)
RAP211_col_a 		0.682 0.860
RAP2-11
M06666_2.00 		Arabidopsis thaliana
HNNNGCCGGCSDNND
HNNHSGCCGGCNNND		 Dap-seq
OMalley et al.(2016)
RAP211_colamp_a 		0.682 0.860
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EFJ26158 AP2 4 54

Links

Other AP2 family TFs
Other Selaginella moellendorffii TFs

73 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
RAP2-11 Arabidopsis thaliana AT5G19790 D 0.682
TCM_040015 Theobroma cacao TCM_040015 I 0.683
Aquca_004_00669 Aquilegia coerulea Aquca_004_00669 I 0.679
Aquca_002_00706 Aquilegia coerulea Aquca_002_00706 I 0.684
mgf022665m Mimulus guttatus mgf022665m I 0.680
cassava9887.m1 Manihot esculenta cassava9887.m1 I 0.720
cassava9290.m1 Manihot esculenta cassava9290.m1 I 0.696
30084.m000185 Ricinus communis 30084.m000185 I 0.682
Pm025326 Prunus mume Pm025326 I 0.683
Ca_08232 Cicer arietinum Ca_08232 I 0.683
RAP2.11 Vitis vinifera VIT_08s0007g07250 I 0.683
Bostr.26527s0221 Boechera stricta Bostr.26527s0221 I 0.682
TCM_025913 Theobroma cacao TCM_025913 I 0.683
Solyc02g067020.1 Solanum lycopersicum Solyc02g067020.1 I 0.685
Si033237m.g Setaria italica Si033237m.g I 0.683
SELMODRAFT_73145 Selaginella moellendorffii SELMODRAFT_73145 I 0.726
SELMODRAFT_73140 Selaginella moellendorffii SELMODRAFT_73140 I 0.726
SELMODRAFT_28575 Selaginella moellendorffii SELMODRAFT_28575 I 0.808
RAP2.11 Arabidopsis lyrata scaffold_602074.1 I 0.682
Lus10013764.g Linum usitatissimum Lus10013764.g I 0.698
chr1.CM0371.120.nc Lotus japonicus chr1.CM0371.120.nc I 0.683
Thhalv10015715m.g Eutrema salsugineum Thhalv10015715m.g I 0.682
SapurV1A.0918s0170 Salix purpurea SapurV1A.0918s0170 I 0.683
Pavir.Bb00676 Panicum virgatum Pavir.Bb00676 I 0.677
Pavir.Ba03636 Panicum virgatum Pavir.Ba03636 I 0.682
MDP0000177547 Malus domestica MDP0000177547 I 0.683
MDP0000172804 Malus domestica MDP0000172804 I 0.692
Lus10039171.g Linum usitatissimum Lus10039171.g I 0.701
Sb02g006023 Sorghum bicolor Sb02g006023 I 0.683
Gorai.013G244500 Gossypium raimondii Gorai.013G244500 I 0.683
Gorai.007G260900 Gossypium raimondii Gorai.007G260900 I 0.698
gene16598-v1.0-hybrid Fragaria vesca gene16598-v1.0-hybrid I 0.683
evm.TU.supercontig_51.136 Carica papaya evm.TU.supercontig_51.136 I 0.683
Eucgr.B03605 Eucalyptus grandis Eucgr.B03605 I 0.696
Carubv10002733m.g Capsella rubella Carubv10002733m.g I 0.682
Cagra.1268s0022 Capsella grandiflora Cagra.1268s0022 I 0.682
BRADI1G54450 Brachypodium distachyon BRADI1G54450 I 0.697
MLOC_18783 Hordeum vulgare MLOC_18783 I 0.709
LPERR12G14340 Leersia perrieri LPERR12G14340 I 0.720
LPERR07G05890 Leersia perrieri LPERR07G05890 I 0.683
GSMUA_Achr4G28640_001 Musa acuminata GSMUA_Achr4G28640_001 I 0.683
GLYMA19G29000 Glycine max GLYMA19G29000 I 0.683
GLYMA18G49761 Glycine max GLYMA18G49761 I 0.685
GLYMA16G27040 Glycine max GLYMA16G27040 I 0.705
GLYMA16G04410 Glycine max GLYMA16G04410 I 0.683
GLYMA02G08020 Glycine max GLYMA02G08020 I 0.705
MTR_7g085810 Medicago truncatula MTR_7g085810 I 0.683
Bra020063 Brassica rapa Bra020063 I 0.682
Bra006518 Brassica rapa Bra006518 I 0.682
Bra002262 Brassica rapa Bra002262 I 0.682
Bo9g152440 Brassica oleracea Bo9g152440 I 0.682
Bo3g013830 Brassica oleracea Bo3g013830 I 0.682
Bo2g018360 Brassica oleracea Bo2g018360 I 0.682
BGIOSGA025360 Oryza indica BGIOSGA025360 I 0.683
AMTR_s00068p00102110 Amborella trichopoda AMTR_s00068p00102110 I 0.681
OS07G0204000 Oryza sativa OS07G0204000 I 0.683
PRUPE_ppa016109mg Prunus persica PRUPE_ppa016109mg I 0.683
POPTR_0013s05330 Populus trichocarpa POPTR_0013s05330 I 0.707
POPTR_0003s21090 Populus trichocarpa POPTR_0003s21090 I 0.683
POPTR_0001s04190 Populus trichocarpa POPTR_0001s04190 I 0.683
PGSC0003DMG400025151 Solanum tuberosum PGSC0003DMG400025151 I 0.685
AMTR_s00058p00066390 Amborella trichopoda AMTR_s00058p00066390 I 0.718
ORUFI07G06610 Oryza rufipogon ORUFI07G06610 I 0.683
ORGLA07G0057000 Oryza glaberrima ORGLA07G0057000 I 0.683
OPUNC07G06390 Oryza punctata OPUNC07G06390 I 0.678
ONIVA01G29960 Oryza nivara ONIVA01G29960 I 0.683
OLONG_022569 Oryza longistaminata OLONG_022569 I 0.683
OGLUM07G06400 Oryza glumaepatula OGLUM07G06400 I 0.683
OBART07G06690 Oryza barthii OBART07G06690 I 0.683
OB07G15030 Oryza brachyantha OB07G15030 I 0.683
Solyc10g078610.1 Solanum lycopersicum Solyc10g078610.1 N 0.705
PGSC0003DMG400008352 Solanum tuberosum PGSC0003DMG400008352 N 0.741
SELMODRAFT_72871 Selaginella moellendorffii SELMODRAFT_72871 N 0.735