VIT_13s0019g03550 (Vitis vinifera)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00847 (AP2) IPR001471 VIT_13s0019g03550 T006097_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAP2.7
M00845_2.00 		Arabidopsis thaliana
KRCGRGGD
HCCYCGYM		 PBM
Franco-Zorrilla et al.(2014)
TOE1 		0.841 0.969
Q9XHD4_PETHY
M09737_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AP2A_01 		0.837 0.939
Q9XHD3_PETHY
M09736_2.00 		Petunia x hybrida Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$AP2B_01 		0.825 0.949
P93632_MAIZE
M09712_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$GL15_01 		0.791 0.827
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
VIT_13s0019g03550.t01 AP2 164 213
VIT_13s0019g03550.t01 AP2 256 307

Links

Other AP2 family TFs
Other Vitis vinifera TFs

241 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ACOM023832 Anopheles coluzzii ACOM023832 N 0.000
Pavir.Da00612 Panicum virgatum Pavir.Da00612 N 0.000
Pavir.J25952 Panicum virgatum Pavir.J25952 N 0.000
SapurV1A.0216s0430 Salix purpurea SapurV1A.0216s0430 N 0.000
SapurV1A.2929s0030 Salix purpurea SapurV1A.2929s0030 N 0.000
HHAL003716-PA Halyomorpha halys HHAL003716-PA N 0.000
Sjc_0111140 Schistosoma japonicum Sjc_0111140 N 0.000
Genemark.397_g Heterobasidion annosum Genemark.397_g N 0.000
GG.C169_S05_00378 Chlorella vulgaris GG.C169_S05_00378 N 0.000
Lus10008531.g Linum usitatissimum Lus10008531.g N 0.000
ASIM_0001638701 Anisakis simplex ASIM_0001638701 N 0.000
OESDEN_17751 Oesophagostomum dentatum OESDEN_17751 N 0.000
SBAD_0000429301 Soboliphyme baturini SBAD_0000429301 N 0.000
SMTD_0000131801 Schistosoma mattheei SMTD_0000131801 N 0.000
SPER_0000246801 Spirometra erinaceieuropaei SPER_0000246801 N 0.000
SPER_0003392901 Spirometra erinaceieuropaei SPER_0003392901 N 0.000
SPER_0003827801 Spirometra erinaceieuropaei SPER_0003827801 N 0.000
SROB_0001561301 Schistosoma rodhaini SROB_0001561301 N 0.000
PHUM027610 Pediculus humanus PHUM027610 N 0.000
ENSCJAG00000034027 Callithrix jacchus ENSCJAG00000034027 N 0.000
ENSCSAVG00000005880 Ciona savignyi ENSCSAVG00000005880 N 0.000
F775_31416 Aegilops tauschii F775_31416 N 0.000
GL12242 Drosophila persimilis FBgn0149849 N 0.000
GD20218 Drosophila simulans FBgn0191696 N 0.000
MESCA003685 Megaselia scalaris MESCA003685 N 0.000
MLOC_7381 Hordeum vulgare MLOC_7381 N 0.000
PGSC0003DMG401018896 Solanum tuberosum PGSC0003DMG401018896 N 0.000
Bra015737 Brassica rapa Bra015737 N 0.000
SPU_003500 Strongylocentrotus purpuratus SPU_003500 N 0.000
SPU_009801 Strongylocentrotus purpuratus SPU_009801 N 0.000
Myotis_brandtii_ARID2_10029491 Myotis brandtii Myotis_brandtii_ARID2_10029491 N 0.000
Myotis_brandtii_Arid3c_10010321 Myotis brandtii Myotis_brandtii_Arid3c_10010321 N 0.000
cassava32082.m1 Manihot esculenta cassava32082.m1 N 0.000
cassava33852.m1 Manihot esculenta cassava33852.m1 N 0.000
gene11760-v1.0-hybrid Fragaria vesca gene11760-v1.0-hybrid N 0.000
Genemark1.2983_g Coccomyxa subellipsoidea C169 Genemark1.2983_g N 0.000