Cla004291 (Citrullus lanatus)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Cla004291 T006417_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
CRF2
M01622_2.00 		Arabidopsis thaliana
SCGCCGCC
GGCGGCGS		 PBM
Weirauch et al.(2014)
pTH8680 		0.827 0.920
CRF3
M01633_2.00 		Arabidopsis thaliana
NNGCCRNNN
NNNYGGCNN		 PBM
Weirauch et al.(2014)
pTH8110 		0.807 0.840
CRF4
M01626_2.00 		Arabidopsis thaliana
SCGCCGCC
GGCGGCGS		 PBM
Weirauch et al.(2014)
pTH8261 		0.794 0.820
CRF4
M06645_2.00 		Arabidopsis thaliana
BMDCCGCCGCCRCHDHHDCYN
NRGHDDHDGYGGCGGCGGHKV		 Dap-seq
OMalley et al.(2016)
CRF4_col_a 		0.794 0.820
CRF4
M06646_2.00 		Arabidopsis thaliana
YCDYCGCCGCCGYYD
HRRCGGCGGCGRHGR		 Dap-seq
OMalley et al.(2016)
CRF4_colamp_a 		0.794 0.820
LOC_Os08g36920
M01634_2.00 		Oryza sativa
NNNGSCGHNN
NNDCGSCNNN		 PBM
Weirauch et al.(2014)
pTH8596 		0.775 0.760
ERF069
M01604_2.00 		Arabidopsis thaliana
NNGCCGNNN
NNNCGGCNN		 PBM
Weirauch et al.(2014)
pTH7550 		0.773 0.820
O65242_TOBAC
M09730_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$TSI1_01 		0.766 0.780
AT2G33710
M01613_2.00 		Arabidopsis thaliana
NSMGCCGHMN
NKDCGGCKSN		 PBM
Weirauch et al.(2014)
pTH7543 		0.729 0.680
AT2G33710
M06606_2.00 		Arabidopsis thaliana
DBCGCCGCCGYHDHHDNH
DNHDDHDRCGGCGGCGVH		 Dap-seq
OMalley et al.(2016)
At2g33710_colamp_a 		0.729 0.680
AT2G33710
M06607_2.00 		Arabidopsis thaliana
NHDYCKCCGCCGYMD
HKRCGGCGGMGRHDN		 Dap-seq
OMalley et al.(2016)
At2g33710_col 		0.729 0.680
ERF113
M01629_2.00 		Arabidopsis thaliana
NNGCCGHHNN
NNDDCGGCNN		 PBM
Weirauch et al.(2014)
pTH8097 		0.718 0.640
ERF091
M06638_2.00 		Arabidopsis thaliana
NNHNYHDCCGCCGCCRY
RYGGCGGCGGHDRNDNN		 Dap-seq
OMalley et al.(2016)
AT4G18450_col_a 		0.717 0.680
A4F249_TOBAC
M09726_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$WRAF2_01 		0.714 0.740
ERF2_TOBAC
M09727_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF2_01 		0.711 0.660
ERF5
M00721_2.00 		Arabidopsis thaliana
NNNGSMRNMN
NKNYKSCNNN		 PBM
Chang et al.(2013)
pTH7197 		0.707 0.680
ERF5
M06674_2.00 		Arabidopsis thaliana
YCDYCKCCGCCGYCD
HGRCGGCGGMGRHGR		 Dap-seq
OMalley et al.(2016)
ERF5_col_a 		0.707 0.680
ERF5
M06675_2.00 		Arabidopsis thaliana
NHDBCGCCGCCRYHDNHDNNN
NNNHDNHDRYGGCGGCGVHDN		 Dap-seq
OMalley et al.(2016)
ERF5_colamp_a 		0.707 0.680
ERF5_TOBAC
M09729_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF4_02 		0.706 0.680
RAP2-2
M00719_2.00 		Arabidopsis thaliana
NNRBYGNN
NNCRVYNN		 PBM
Chang et al.(2013)
pTH7227 		0.703 0.660
ERF4_TOBAC
M09728_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF3_02 		0.703 0.640
ERF4
M01616_2.00 		Arabidopsis thaliana
VCGCCGCC
GGCGGCGB		 PBM
Weirauch et al.(2014)
pTH8156 		0.703 0.620
ERF4
M06616_2.00 		Arabidopsis thaliana
YCDCCGCCGCCRHHD
HDDYGGCGGCGGHGR		 Dap-seq
OMalley et al.(2016)
ERF4_col_a 		0.703 0.620
ERF4
M06617_2.00 		Arabidopsis thaliana
NHNNHNSCGCCGYCRHHDNN
NNHDDYGRCGGCGSNDNNDN		 Dap-seq
OMalley et al.(2016)
ERF4_colamp_a 		0.703 0.620
A4F248_TOBAC
M09725_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$WRAF1_01 		0.699 0.700
ERF9
M06670_2.00 		Arabidopsis thaliana
YCDCCGCCGYCDHHDYHDYHN
NDRHDRHDDHGRCGGCGGHGR		 Dap-seq
OMalley et al.(2016)
ERF9_col_a 		0.699 0.640
ERF9
M06671_2.00 		Arabidopsis thaliana
NNHDSCGCCGYCRHWDN
NHWDYGRCGGCGSHDNN		 Dap-seq
OMalley et al.(2016)
ERF9_colamp_a 		0.699 0.640
PK19363.1
M01100_2.00 		Cannabis sativa
NMGCCGHMNN
NNKDCGGCKN		 PBM
Lambert et al.(2019)
pTH10138 		0.697 0.620
PK19363.1
M01643_2.00 		Cannabis sativa
CGCCGYCD
HGRCGGCG		 PBM
Weirauch et al.(2014)
pTH9609 		0.697 0.620
Q7Y1W2_TOBAC
M09735_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$CEF1_01 		0.696 0.640
Q5Y836_TOBAC
M09732_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF5_02 		0.695 0.660
Q84J59_MAIZE
M09717_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$BD1_01 		0.695 0.580
ERF10
M06562_2.00 		Arabidopsis thaliana
NNHNNHNHHDYCGCCGCCRYN
NRYGGCGGCGRHDDNDNNDNN		 Dap-seq
OMalley et al.(2016)
ERF10_col_a 		0.693 0.600
ERF10
M06563_2.00 		Arabidopsis thaliana
HDSCGCCGCCRHHDNNNNNN
NNNNNNHDDYGGCGGCGSHD		 Dap-seq
OMalley et al.(2016)
ERF10_colamp_a 		0.693 0.600
ERF104
M06682_2.00 		Arabidopsis thaliana
NNHHDYMDCCGCCGCCRYH
DRYGGCGGCGGHKRHDDNN		 Dap-seq
OMalley et al.(2016)
ERF104_col_a 		0.692 0.660
ERF104
M06683_2.00 		Arabidopsis thaliana
BHDSCGCCGCCRYHD
HDRYGGCGGCGSHDV		 Dap-seq
OMalley et al.(2016)
ERF104_colamp_a 		0.692 0.660
ERF086
M06663_2.00 		Arabidopsis thaliana
HHDYCKCCGCCGYHD
HDRCGGCGGMGRHDD		 Dap-seq
OMalley et al.(2016)
PUCHI_col_a 		0.691 0.600
ERF086
M06664_2.00 		Arabidopsis thaliana
NNNNHDHCKCCGCCGYHDHHDHNNN
NNNDHDDHDRCGGCGGMGDHDNNNN		 Dap-seq
OMalley et al.(2016)
PUCHI_colamp_a 		0.691 0.600
ERF096
M01630_2.00 		Arabidopsis thaliana
NVGCCGNCNN
NNGNCGGCBN		 PBM
Weirauch et al.(2014)
pTH7909 		0.691 0.660
ERF105
M01632_2.00 		Arabidopsis thaliana
CGCCGGCM
KGCCGGCG		 PBM
Weirauch et al.(2014)
pTH7233 		0.689 0.660
ERF105
M06676_2.00 		Arabidopsis thaliana
NHNNNNNNNNHNNHDBCGCCGCCR
YGGCGGCGVHDNNDNNNNNNNNDN		 Dap-seq
OMalley et al.(2016)
ERF105_colamp_a 		0.689 0.660
ERF105
M06677_2.00 		Arabidopsis thaliana
HDSCGCCGCCRYHDH
DHDRYGGCGGCGSHD		 Dap-seq
OMalley et al.(2016)
ERF105_col 		0.689 0.660
PK02330.1
M01095_2.00 		Cannabis sativa
NNNGCCGBCN
NGVCGGCNNN		 PBM
Lambert et al.(2019)
pTH10093 		0.689 0.660
RAP2-12
M01046_2.00 		Arabidopsis thaliana
RSMGBMNNNN
NNNNKVCKSY		 PBM
Sullivan et al.(2014)
pTH7359 		0.686 0.640
RAP2-12
M06588_2.00 		Arabidopsis thaliana
NHDCCGCCGCCRHHDHNNNHN
NDNNNDHDDYGGCGGCGGHDN		 Dap-seq
OMalley et al.(2016)
RAP212_col_a 		0.686 0.640
EREBP1
M09708_2.00 		Oryza sativa Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$EREBP1_01 		0.684 0.640
LEP
M06661_2.00 		Arabidopsis thaliana
NBCKCCGCCGYHDHHDYHNHH
DDNDRHDDHDRCGGCGGMGVN		 Dap-seq
OMalley et al.(2016)
LEP_col_a 		0.684 0.620
0100010458
M01644_2.00 		Ostreococcus tauri
MGCCGSCR
YGSCGGCK		 PBM
Weirauch et al.(2014)
pTH9447 		0.683 0.660
ERF109
M00849_2.00 		Arabidopsis thaliana
NGCCGNHNN
NNDNCGGCN		 PBM
Franco-Zorrilla et al.(2014)
RRTF1 		0.681 0.660
ERF109
M06653_2.00 		Arabidopsis thaliana
CKSCGCCGYHWHHNN
NNDDWDRCGGCGSMG		 Dap-seq
OMalley et al.(2016)
RRTF1_col_a 		0.681 0.660
ERF109
M06654_2.00 		Arabidopsis thaliana
HNNHDSCGCCGYHWTHNNN
NNNDAWDRCGGCGSHDNND		 Dap-seq
OMalley et al.(2016)
RRTF1_colamp_a 		0.681 0.660
ERF1A
M00848_2.00 		Arabidopsis thaliana
NNNNRNN
NNYNNNN		 PBM
Franco-Zorrilla et al.(2014)
ATERF1 		0.680 0.640
ERF1A
M00720_2.00 		Arabidopsis thaliana
NMGCCRNCN
NGNYGGCKN		 PBM
Chang et al.(2013)
pTH7202 		0.680 0.640
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Cla004291 AP2 104 155

Links

Other AP2 family TFs
Other Citrullus lanatus TFs

1630 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TFE3 Homo sapiens ENSG00000068323 D
MITF Homo sapiens ENSG00000187098 D
Tfe3 Mus musculus ENSMUSG00000000134 D
Mitf Mus musculus ENSMUSG00000035158 D
MITF Anolis carolinensis ENSACAG00000013586 I
TFE3 Anolis carolinensis ENSACAG00000022140 I
ENSAMEG00000012353 Ailuropoda melanoleuca ENSAMEG00000012353 I
ENSAMEG00000017117 Ailuropoda melanoleuca ENSAMEG00000017117 I
ENSAMXG00000020781 Astyanax mexicanus ENSAMXG00000020781 I
ENSAPLG00000011965 Anas platyrhynchos ENSAPLG00000011965 I
MITF Bos taurus ENSBTAG00000006679 I
TFE3 Bos taurus ENSBTAG00000008523 I
MITF Canis familiaris ENSCAFG00000006496 I
TFE3 Canis familiaris ENSCAFG00000015765 I
ENSCING00000004702 Ciona intestinalis ENSCING00000004702 I
MITF Callithrix jacchus ENSCJAG00000013260 I
TFE3 Cavia porcellus ENSCPOG00000012410 I
MITF Cavia porcellus ENSCPOG00000014963 I
ENSCSAG00000011595 Chlorocebus sabaeus ENSCSAG00000011595 I
ENSCSAG00000013021 Chlorocebus sabaeus ENSCSAG00000013021 I
ENSCSAVG00000010462 Ciona savignyi ENSCSAVG00000010462 I
mitfa Danio rerio ENSDARG00000003732 I
tfe3b Danio rerio ENSDARG00000019457 I
mitfb Danio rerio ENSDARG00000037833 I
tfe3a Danio rerio ENSDARG00000098903 I
MITF Dasypus novemcinctus ENSDNOG00000037006 I
TFE3 Dasypus novemcinctus ENSDNOG00000039173 I
Mitf Dipodomys ordii ENSDORG00000003336 I
ENSDORG00000013258 Dipodomys ordii ENSDORG00000013258 I
MITF Equus caballus ENSECAG00000005360 I
TFE3 Equus caballus ENSECAG00000020642 I
MITF Erinaceus europaeus ENSEEUG00000005163 I
ENSFALG00000013383 Ficedula albicollis ENSFALG00000013383 I
TFE3 Felis catus ENSFCAG00000002574 I
MITF Felis catus ENSFCAG00000024419 I
mitfb Gasterosteus aculeatus ENSGACG00000003425 I
tfe3b Gasterosteus aculeatus ENSGACG00000010355 I
mitfa Gasterosteus aculeatus ENSGACG00000011875 I
ENSGALG00000007679 Gallus gallus ENSGALG00000007679 I
TFE3 Gorilla gorilla ENSGGOG00000014023 I
MITF Gorilla gorilla ENSGGOG00000024338 I
ENSGMOG00000007421 Gadus morhua ENSGMOG00000007421 I
ENSGMOG00000010175 Gadus morhua ENSGMOG00000010175 I
ENSGMOG00000018115 Gadus morhua ENSGMOG00000018115 I
ENSLACG00000011547 Latimeria chalumnae ENSLACG00000011547 I
MITF Loxodonta africana ENSLAFG00000023153 I
TFE3 Loxodonta africana ENSLAFG00000025585 I
ENSLOCG00000010058 Lepisosteus oculatus ENSLOCG00000010058 I
ENSLOCG00000014691 Lepisosteus oculatus ENSLOCG00000014691 I
MITF Meleagris gallopavo ENSMGAG00000009507 I
ENSMICG00000002894 Microcebus murinus ENSMICG00000002894 I
TFE3 Microcebus murinus ENSMICG00000009708 I
MITF Myotis lucifugus ENSMLUG00000002587 I
TFE3 Myotis lucifugus ENSMLUG00000030217 I
MITF Macaca mulatta ENSMMUG00000002100 I
TFE3 Macaca mulatta ENSMMUG00000023494 I
MITF Monodelphis domestica ENSMODG00000003754 I
TFE3 Monodelphis domestica ENSMODG00000009925 I
ENSMPUG00000013794 Mustela putorius furo ENSMPUG00000013794 I
ENSMPUG00000016972 Mustela putorius furo ENSMPUG00000016972 I
ENSNLEG00000002357 Nomascus leucogenys ENSNLEG00000002357 I
ENSNLEG00000007963 Nomascus leucogenys ENSNLEG00000007963 I
ENSOANG00000012406 Ornithorhynchus anatinus ENSOANG00000012406 I
TFE3 Ornithorhynchus anatinus ENSOANG00000013574 I
ENSOARG00000009833 Ovis aries ENSOARG00000009833 I
ENSOARG00000011157 Ovis aries ENSOARG00000011157 I
MITF Oryctolagus cuniculus ENSOCUG00000002190 I
TFE3 Oryctolagus cuniculus ENSOCUG00000015807 I
MITF Otolemur garnettii ENSOGAG00000000043 I
TFE3 Otolemur garnettii ENSOGAG00000031330 I
ENSONIG00000000820 Oreochromis niloticus ENSONIG00000000820 I
ENSONIG00000016952 Oreochromis niloticus ENSONIG00000016952 I
ENSONIG00000020270 Oreochromis niloticus ENSONIG00000020270 I
ENSONIG00000020291 Oreochromis niloticus ENSONIG00000020291 I
TFE3 Ochotona princeps ENSOPRG00000007735 I
mitfa Oryzias latipes ENSORLG00000003123 I
mitfb Oryzias latipes ENSORLG00000013461 I
tfe3b Oryzias latipes ENSORLG00000014134 I
ENSPANG00000011565 Papio anubis ENSPANG00000011565 I
ENSPANG00000013676 Papio anubis ENSPANG00000013676 I
TFE3 Procavia capensis ENSPCAG00000003945 I
ENSPFOG00000001499 Poecilia formosa ENSPFOG00000001499 I
ENSPFOG00000006677 Poecilia formosa ENSPFOG00000006677 I
ENSPFOG00000007171 Poecilia formosa ENSPFOG00000007171 I
ENSPMAG00000001002 Petromyzon marinus ENSPMAG00000001002 I
ENSPMAG00000004927 Petromyzon marinus ENSPMAG00000004927 I
ENSPMAG00000008619 Petromyzon marinus ENSPMAG00000008619 I
ENSPPYG00000013725 Pongo abelii ENSPPYG00000013725 I
ENSPPYG00000029376 Pongo abelii ENSPPYG00000029376 I
ENSPSIG00000012120 Pelodiscus sinensis ENSPSIG00000012120 I
MITF Pan troglodytes ENSPTRG00000015100 I
TFE3 Pteropus vampyrus ENSPVAG00000009435 I
Mitf Rattus norvegicus ENSRNOG00000008658 I
Tfe3 Rattus norvegicus ENSRNOG00000009605 I
TFE3 Sorex araneus ENSSARG00000000644 I
MITF Sorex araneus ENSSARG00000002538 I
ENSSHAG00000003327 Sarcophilus harrisii ENSSHAG00000003327 I
ENSSHAG00000017522 Sarcophilus harrisii ENSSHAG00000017522 I
TFE3 Sus scrofa ENSSSCG00000012287 I
ENSSTOG00000014237 Ictidomys tridecemlineatus ENSSTOG00000014237 I
MITF Tupaia belangeri ENSTBEG00000017713 I
MITF Taeniopygia guttata ENSTGUG00000009847 I
tfe3b Tetraodon nigroviridis ENSTNIG00000007324 I
mitfa Tetraodon nigroviridis ENSTNIG00000007360 I
mitfb Tetraodon nigroviridis ENSTNIG00000012564 I
ENSTNIG00000019469 Tetraodon nigroviridis ENSTNIG00000019469 I
mitfa Takifugu rubripes ENSTRUG00000001600 I
tfe3a Takifugu rubripes ENSTRUG00000005584 I
mitfb Takifugu rubripes ENSTRUG00000012080 I
tfe3b Takifugu rubripes ENSTRUG00000013198 I
ENSTSYG00000011324 Tarsius syrichta ENSTSYG00000011324 I
MITF Tursiops truncatus ENSTTRG00000007072 I
TFE3 Tursiops truncatus ENSTTRG00000009064 I
ENSXMAG00000002200 Xiphophorus maculatus ENSXMAG00000002200 I
ENSXMAG00000007656 Xiphophorus maculatus ENSXMAG00000007656 I
ENSXMAG00000016472 Xiphophorus maculatus ENSXMAG00000016472 I
Aan_R007225 Calypte anna Aan_R007225 I
Afo_R011673 Aptenodytes forsteri Afo_R011673 I
Alligator_sinensis_CCG002397.1 Alligator sinensis Alligator_sinensis_CCG002397.1 I
Alligator_sinensis_CCG004214.1 Alligator sinensis Alligator_sinensis_CCG004214.1 I
Brh_R009446 Buceros rhinoceros Brh_R009446 I
ENSBTAP00000053693-D1 Bos grunniens ENSBTAP00000053693-D1 I
ENSMMUP00000030934 Macaca fascicularis ENSMMUP00000030934 I
ENSP00000338360-D1 Bos grunniens ENSP00000338360-D1 I
ENSP00000391803 Macaca fascicularis ENSP00000391803 I
Gfo_R014572 Geospiza fortis Gfo_R014572 I
Myotis_brandtii_Mitf_10022588 Myotis brandtii Myotis_brandtii_Mitf_10022588 I
Myotis_brandtii_TFE3_10010865 Myotis brandtii Myotis_brandtii_TFE3_10010865 I
Pvit_00330 Pogona vitticeps Pvit_00330 I
Pvit_01233 Pogona vitticeps Pvit_01233 I
Tal_R001329 Tyto alba Tal_R001329 I
e_gw.492.5.1 Branchiostoma floridae e_gw.492.5.1 I
mitf Xenopus tropicalis XB-GENE-484962 I
tfe3.S Xenopus laevis XB-GENE-5918226 I
mitf.L Xenopus laevis XB-GENE-6252679 I
mitf.S Xenopus laevis XB-GENE-6464338 I