Pm013734 (Prunus mume)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Pm013734 T006591_2.00 GigaDB (2015-Oct-22)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PK19363.1
M01100_2.00 		Cannabis sativa
NMGCCGHMNN
NNKDCGGCKN		 PBM
Lambert et al.(2019)
pTH10138 		0.686 0.725
PK19363.1
M01643_2.00 		Cannabis sativa
CGCCGYCD
HGRCGGCG		 PBM
Weirauch et al.(2014)
pTH9609 		0.686 0.725
ERF9
M06670_2.00 		Arabidopsis thaliana
YCDCCGCCGYCDHHDYHDYHN
NDRHDRHDDHGRCGGCGGHGR		 Dap-seq
OMalley et al.(2016)
ERF9_col_a 		0.684 0.706
ERF9
M06671_2.00 		Arabidopsis thaliana
NNHDSCGCCGYCRHWDN
NHWDYGRCGGCGSHDNN		 Dap-seq
OMalley et al.(2016)
ERF9_colamp_a 		0.684 0.706
ERF4
M01616_2.00 		Arabidopsis thaliana
VCGCCGCC
GGCGGCGB		 PBM
Weirauch et al.(2014)
pTH8156 		0.679 0.745
ERF4
M06616_2.00 		Arabidopsis thaliana
YCDCCGCCGCCRHHD
HDDYGGCGGCGGHGR		 Dap-seq
OMalley et al.(2016)
ERF4_col_a 		0.679 0.745
ERF4
M06617_2.00 		Arabidopsis thaliana
NHNNHNSCGCCGYCRHHDNN
NNHDDYGRCGGCGSNDNNDN		 Dap-seq
OMalley et al.(2016)
ERF4_colamp_a 		0.679 0.745
ERF4_TOBAC
M09728_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF3_02 		0.678 0.706
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Pm013734 AP2 147 198

Links

Other AP2 family TFs
Other Prunus mume TFs

224 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PYU1_G006823 Pythium ultimum PYU1_G006823 I 0.000
F443_04726 Phytophthora parasitica F443_04726 N 0.000
fgenesh-par_contig_48-abinit-gene-0.93 Pythium arrhenomanes fgenesh-par_contig_48-abinit-gene-0.93 N 0.000
fgenesh_scip_prom.28083.7384 Phytophthora lateralis fgenesh_scip_prom.28083.7384 N 0.000
fgenesh_scip_prom.46568.4988 Phytophthora kernoviae fgenesh_scip_prom.46568.4988 N 0.000
maker-pag1_scaffold_223-snap-gene-0.15 Pythium aphanidermatum maker-pag1_scaffold_223-snap-gene-0.15 N 0.000
maker-pag1_scaffold_73-snap-gene-0.36 Pythium aphanidermatum maker-pag1_scaffold_73-snap-gene-0.36 N 0.000
maker-pir_contig_839-snap-gene-0.7 Pythium irregulare maker-pir_contig_839-snap-gene-0.7 N 0.000
maker-pve_contig_301-fgenesh-gene-0.3 Pythium vexans maker-pve_contig_301-fgenesh-gene-0.3 N 0.000
Phyra85853 Phytophthora ramorum Phyra85853 N 0.000
Phyra85854 Phytophthora ramorum Phyra85854 N 0.000
Physo128590 Phytophthora sojae Physo128590 N 0.000
PITG_17391 Phytophthora infestans PITG_17391 N 0.000
PYU1_G006824 Pythium ultimum PYU1_G006824 N 0.000
estExt_fgenesh1_pg.C_90307 Micromonas pusilla estExt_fgenesh1_pg.C_90307 N 0.000
estExt_fgenesh1_kg.C_170712 Phytophthora capsici estExt_fgenesh1_kg.C_170712 N 0.000