gw1.14.214.1 (Physcomitrella patens)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 gw1.14.214.1 T007263_2.00 JGI (2012-Mar-17)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
gw1.8.141.1
M01642_2.00 		Physcomitrella patens
CACCGACM
KGTCGGTG		 PBM
Weirauch et al.(2014)
pTH8456 		0.736 0.958
estExt_gwp_gw1.C_550163
M01640_2.00 		Physcomitrella patens
NCACCGACHN
NDGTCGGTGN		 PBM
Weirauch et al.(2014)
pTH8472 		0.723 0.875
Q8LKX0_MAIZE
M09722_2.00 		Zea mays Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$DBF2_01 		0.695 0.771
estExt_fgenesh1_pg.C_4800009
M01639_2.00 		Physcomitrella patens
MACCGACM
KGTCGGTK		 PBM
Weirauch et al.(2014)
pTH8488 		0.681 0.854
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
gw1.14.214.1 AP2 1 50

Links

Other AP2 family TFs
Other Physcomitrella patens TFs

66 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SPT Arabidopsis thaliana AT4G36930 D 0.000
Ciclev10025735m.g Citrus clementina Ciclev10025735m.g I 0.000
VIT_18s0001g10270 Vitis vinifera VIT_18s0001g10270 I 0.000
Carubv10005083m.g Capsella rubella Carubv10005083m.g I 0.000
Cagra.4909s0047 Capsella grandiflora Cagra.4909s0047 I 0.000
Bostr.7867s1578 Boechera stricta Bostr.7867s1578 I 0.000
Aquca_007_00702 Aquilegia coerulea Aquca_007_00702 I 0.000
mgf000445m Mimulus guttatus mgf000445m I 0.000
mg025182m Mimulus guttatus mg025182m I 0.000
Cucsa.102530 Cucumis sativus Cucsa.102530 I 0.000
cassava47359.m1 Manihot esculenta cassava47359.m1 I 0.000
cassava44831.m1 Manihot esculenta cassava44831.m1 I 0.000
cassava35035.m1 Manihot esculenta cassava35035.m1 I 0.000
30170.m013852 Ricinus communis 30170.m013852 I 0.000
30115.m001235 Ricinus communis 30115.m001235 I 0.000
Pm026389 Prunus mume Pm026389 I 0.000
Cla000718 Citrullus lanatus Cla000718 I 0.000
Ca_02162 Cicer arietinum Ca_02162 I 0.000
LjT43O20.130.nd Lotus japonicus LjT43O20.130.nd I 0.000
MDP0000523812 Malus domestica MDP0000523812 I 0.000
AMTR_s00046p00066610 Amborella trichopoda AMTR_s00046p00066610 I 0.000
PK27964.1 Cannabis sativa PK27964.1 I 0.000
Thhalv10025554m.g Eutrema salsugineum Thhalv10025554m.g I 0.000
SapurV1A.0603s0060 Salix purpurea SapurV1A.0603s0060 I 0.000
SapurV1A.0423s0130 Salix purpurea SapurV1A.0423s0130 I 0.000
SapurV1A.0167s0140 Salix purpurea SapurV1A.0167s0140 I 0.000
orange1.1g036669m.g Citrus sinensis orange1.1g036669m.g I 0.000
orange1.1g022782m.g Citrus sinensis orange1.1g022782m.g I 0.000
Eucgr.I00906 Eucalyptus grandis Eucgr.I00906 I 0.000
MDP0000215587 Malus domestica MDP0000215587 I 0.000
Lus10041592.g Linum usitatissimum Lus10041592.g I 0.000
Lus10024811.g Linum usitatissimum Lus10024811.g I 0.000
Gorai.009G213800 Gossypium raimondii Gorai.009G213800 I 0.000
Gorai.008G077300 Gossypium raimondii Gorai.008G077300 I 0.000
Gorai.007G214800 Gossypium raimondii Gorai.007G214800 I 0.000
gene23819-v1.0-hybrid Fragaria vesca gene23819-v1.0-hybrid I 0.000
evm.TU.supercontig_21.176 Carica papaya evm.TU.supercontig_21.176 I 0.000
GLYMA14G09231 Glycine max GLYMA14G09231 I 0.000
OGLUM02G37650 Oryza glumaepatula OGLUM02G37650 I 0.000
OB02G43130 Oryza brachyantha OB02G43130 I 0.000
MTR_5g017040 Medicago truncatula MTR_5g017040 I 0.000
GSMUA_Achr8G15670_001 Musa acuminata GSMUA_Achr8G15670_001 I 0.000
GSMUA_Achr7G20810_001 Musa acuminata GSMUA_Achr7G20810_001 I 0.000
GSMUA_Achr10G09040_001 Musa acuminata GSMUA_Achr10G09040_001 I 0.000
GRMZM2G030744 Zea mays GRMZM2G030744 I 0.000
GLYMA17G35951 Glycine max GLYMA17G35951 I 0.000
OMERI02G34410 Oryza meridionalis OMERI02G34410 I 0.000
GLYMA01G39451 Glycine max GLYMA01G39451 I 0.000
SPT Arabidopsis lyrata fgenesh1_pg.C_scaffold_7000292 I 0.000
BRADI1G48400 Brachypodium distachyon BRADI1G48400 I 0.000
Bra011740 Brassica rapa Bra011740 I 0.000
Bra010591 Brassica rapa Bra010591 I 0.000
Bo3g153630 Brassica oleracea Bo3g153630 I 0.000
Bo1g004970 Brassica oleracea Bo1g004970 I 0.000
BGIOSGA005408 Oryza indica BGIOSGA005408 I 0.000
POPTR_0014s02590 Populus trichocarpa POPTR_0014s02590 I 0.000
TCM_033802 Theobroma cacao TCM_033802 I 0.000
TCM_000649 Theobroma cacao TCM_000649 I 0.000
Solyc04g078690.2 Solanum lycopersicum Solyc04g078690.2 I 0.000
Solyc02g093280.2 Solanum lycopersicum Solyc02g093280.2 I 0.000
Si017762m.g Setaria italica Si017762m.g I 0.000
Sb04g036450 Sorghum bicolor Sb04g036450 I 0.000
PRUPE_ppa021918mg Prunus persica PRUPE_ppa021918mg I 0.000
PRUPE_ppa014897mg Prunus persica PRUPE_ppa014897mg I 0.000
VIT_07s0031g00450 Vitis vinifera VIT_07s0031g00450 I 0.000
POPTR_0005s18280 Populus trichocarpa POPTR_0005s18280 I 0.000
PGSC0003DMG400004011 Solanum tuberosum PGSC0003DMG400004011 I 0.000
OS02G0805250 Oryza sativa OS02G0805250 I 0.000
ORUFI02G37990 Oryza rufipogon ORUFI02G37990 I 0.000
ORGLA02G0316800 Oryza glaberrima ORGLA02G0316800 I 0.000
OPUNC02G33630 Oryza punctata OPUNC02G33630 I 0.000
ONIVA02G38510 Oryza nivara ONIVA02G38510 I 0.000