Aquca_096_00025 (Aquilegia coerulea)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Aquca_096_00025 T007536_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PLT1
M06622_2.00 		Arabidopsis thaliana
DDCACGNWWHYCRAGRHNN
NNDYCTYGRDWWNCGTGHH		 Dap-seq
OMalley et al.(2016)
PLT1_col_a 		0.934 0.971
PLT1
M06623_2.00 		Arabidopsis thaliana
DYDCRNWTYYCRAG
CTYGRRAWNYGHRH		 Dap-seq
OMalley et al.(2016)
PLT1_colamp_a 		0.934 0.971
Q6SA75_TOBAC
M09733_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ANTL_01 		0.892 0.914
Q6SA75_TOBAC
M09734_2.00 		Nicotiana tabacum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ANTL_02 		0.892 0.914
ANT
M02647_2.00 		Arabidopsis thaliana
DNRCACRNWTCCCVADGYNHW
WDNRCHTBGGGAWNYGTGYNH		 SELEX
Mathelier et al.(2014)
MA0571.1 		0.889 0.914
ANT
M09705_2.00 		Arabidopsis thaliana
CACRNWTCCCRAKG
CMTYGGGAWNYGTG		 Transfac
Matys et al.(2006)
P$ANT_01 		0.889 0.914
AIL7
M06688_2.00 		Arabidopsis thaliana
CRNWTHYCRAG
CTYGRDAWNYG		 Dap-seq
OMalley et al.(2016)
AIL7_col_a 		0.853 0.886
AIL7
M06689_2.00 		Arabidopsis thaliana
DCRNWTHYCRAG
CTYGRDAWNYGH		 Dap-seq
OMalley et al.(2016)
AIL7_colamp_a 		0.853 0.886
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Aquca_096_00025.1 AP2 162 222
Aquca_096_00025.1 AP2 264 316

Links

Other AP2 family TFs
Other Aquilegia coerulea TFs

626 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PV05_06249 Exophiala xenobiotica PV05_06249 N
Z519_00259 Cladophialophora bantiana Z519_00259 N
Z518_00710 Rhinocladiella mackenziei Z518_00710 N
Z517_07028 Fonsecaea pedrosoi Z517_07028 N
PV11_01935 Exophiala sideris PV11_01935 N
PV10_04253 Exophiala mesophila PV10_04253 N
PV08_09396 Exophiala spinifera PV08_09396 N
PV08_05024 Exophiala spinifera PV08_05024 N
PV07_06025 Cladophialophora immunda PV07_06025 N
PV06_08906 Exophiala oligosperma PV06_08906 N
A1O1_02417 Capronia coronata A1O1_02417 N
PV04_04679 Capronia semiimmersa PV04_04679 N
PV04_00380 Capronia semiimmersa PV04_00380 N
HMPREF1541_09075 Cyphellophora europaea HMPREF1541_09075 N
HMPREF1120_02374 Exophiala dermatitidis HMPREF1120_02374 N
G647_04103 Cladophialophora carrionii G647_04103 N
EPUS_09277 Endocarpon pusillum EPUS_09277 N
A1O9_01560 Exophiala aquamarina A1O9_01560 N
A1O7_04585 Cladophialophora yegresii A1O7_04585 N
A1O3_00670 Capronia epimyces A1O3_00670 N