Ciclev10018044m.g (Citrus clementina)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 Ciclev10018044m.g T008006_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
RAP2-11
M06665_2.00 		Arabidopsis thaliana
NNNYHDYYGCCGBCN
NGVCGGCRRHDRNNN		 Dap-seq
OMalley et al.(2016)
RAP211_col_a 		0.698 0.941
RAP2-11
M06666_2.00 		Arabidopsis thaliana
HNNNGCCGGCSDNND
HNNHSGCCGGCNNND		 Dap-seq
OMalley et al.(2016)
RAP211_colamp_a 		0.698 0.941
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Ciclev10018044m AP2 30 81

Links

Other AP2 family TFs
Other Citrus clementina TFs

66 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Gorai.001G254300 Gossypium raimondii Gorai.001G254300 N 0.000
Pm020580 Prunus mume Pm020580 N 0.000
cassava41082.m1 Manihot esculenta cassava41082.m1 N 0.000
gw1.77.154.1 Physcomitrella patens gw1.77.154.1 N 0.000
mgf009162m Mimulus guttatus mgf009162m N 0.000
mgf018312m Mimulus guttatus mgf018312m N 0.000
Aquca_017_00744 Aquilegia coerulea Aquca_017_00744 N 0.000
Bostr.7867s0694 Boechera stricta Bostr.7867s0694 N 0.000
Cagra.1225s0038 Capsella grandiflora Cagra.1225s0038 N 0.000
Carubv10005139m.g Capsella rubella Carubv10005139m.g N 0.000
Ciclev10021312m.g Citrus clementina Ciclev10021312m.g N 0.000
Eucgr.K03256 Eucalyptus grandis Eucgr.K03256 N 0.000
gene08112-v1.0-hybrid Fragaria vesca gene08112-v1.0-hybrid N 0.000
Gorai.001G178800 Gossypium raimondii Gorai.001G178800 N 0.000
Ca_07743 Cicer arietinum Ca_07743 N 0.000
Gorai.004G221300 Gossypium raimondii Gorai.004G221300 N 0.000
Gorai.007G147300 Gossypium raimondii Gorai.007G147300 N 0.000
Lus10022915.g Linum usitatissimum Lus10022915.g N 0.000
Lus10033905.g Linum usitatissimum Lus10033905.g N 0.000
MDP0000697030 Malus domestica MDP0000697030 N 0.000
Pavir.Ib03261 Panicum virgatum Pavir.Ib03261 N 0.000
Pavir.J11268 Panicum virgatum Pavir.J11268 N 0.000
SapurV1A.0006s0680 Salix purpurea SapurV1A.0006s0680 N 0.000
SapurV1A.0233s0110 Salix purpurea SapurV1A.0233s0110 N 0.000
Thhalv10025606m.g Eutrema salsugineum Thhalv10025606m.g N 0.000
PK19051.1 Cannabis sativa PK19051.1 N 0.000
PDK_20s1301681g003 Phoenix dactylifera PDK_20s1301681g003 N 0.000
PDK_20s1648061g001 Phoenix dactylifera PDK_20s1648061g001 N 0.000
GSMUA_Achr1G20530_001 Musa acuminata GSMUA_Achr1G20530_001 N 0.000
anac074 Arabidopsis thaliana AT4G28530 N 0.000
Bo1g017380 Brassica oleracea Bo1g017380 N 0.000
Bo7g113180 Brassica oleracea Bo7g113180 N 0.000
Bo8g054390 Brassica oleracea Bo8g054390 N 0.000
Bra010362 Brassica rapa Bra010362 N 0.000
Bra011037 Brassica rapa Bra011037 N 0.000
Bra024194 Brassica rapa Bra024194 N 0.000
GLYMA03G32116 Glycine max GLYMA03G32116 N 0.000
GLYMA10G04350 Glycine max GLYMA10G04350 N 0.000
GLYMA13G18620 Glycine max GLYMA13G18620 N 0.000
GLYMA19G34881 Glycine max GLYMA19G34881 N 0.000
GSMUA_Achr11G00880_001 Musa acuminata GSMUA_Achr11G00880_001 N 0.000
GSMUA_Achr1G10860_001 Musa acuminata GSMUA_Achr1G10860_001 N 0.000
AMTR_s00046p00062600 Amborella trichopoda AMTR_s00046p00062600 N 0.000
GSMUA_Achr8G18980_001 Musa acuminata GSMUA_Achr8G18980_001 N 0.000
GSMUA_AchrUn_randomG02760_001 Musa acuminata GSMUA_AchrUn_randomG02760_001 N 0.000
MTR_1g069805 Medicago truncatula MTR_1g069805 N 0.000
MTR_7g097090 Medicago truncatula MTR_7g097090 N 0.000
PGSC0003DMG400010294 Solanum tuberosum PGSC0003DMG400010294 N 0.000
PGSC0003DMG400020147 Solanum tuberosum PGSC0003DMG400020147 N 0.000
PGSC0003DMG400025505 Solanum tuberosum PGSC0003DMG400025505 N 0.000
PRUPE_ppa009628mg Prunus persica PRUPE_ppa009628mg N 0.000
Solyc06g008360.2 Solanum lycopersicum Solyc06g008360.2 N 0.000
Solyc09g025310.2 Solanum lycopersicum Solyc09g025310.2 N 0.000
TCM_003998 Theobroma cacao TCM_003998 N 0.000
Traes_2BL_260DF778A Triticum aestivum Traes_2BL_260DF778A N 0.000