MDP0000907929 (Malus domestica)
AP2

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF00847 (AP2) IPR001471 MDP0000907929 T009197_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
A5JTT1_WHEAT
M09700_2.00 		Triticum aestivum Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
P$ERF3_01 		0.734 0.755
ERF13
M01615_2.00 		Arabidopsis thaliana
VGCCGSCD
HGSCGGCB		 PBM
Weirauch et al.(2014)
pTH7283 		0.710 0.816
ERF13
M06612_2.00 		Arabidopsis thaliana
NHDBMGCCGCCDYHD
HDRHGGCGGCKVHDN		 Dap-seq
OMalley et al.(2016)
ERF13_colamp_a 		0.710 0.816
ERF13
M06613_2.00 		Arabidopsis thaliana
HDBMGCCGCCDYHDN
NHDRHGGCGGCKVHD		 Dap-seq
OMalley et al.(2016)
ERF13_col_b 		0.710 0.816
ERF1A
M00848_2.00 		Arabidopsis thaliana
NNNNRNN
NNYNNNN		 PBM
Franco-Zorrilla et al.(2014)
ATERF1 		0.678 0.776
ERF1A
M00720_2.00 		Arabidopsis thaliana
NMGCCRNCN
NGNYGGCKN		 PBM
Chang et al.(2013)
pTH7202 		0.678 0.776
For this family, TFs with SR scores > 0.677 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
MDP0000907929 AP2 128 180

Links

Other AP2 family TFs
Other Malus domestica TFs

140 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
A5JTT1_WHEAT Triticum aestivum A5JTT1_WHEAT D 0.734
ERF13 Arabidopsis thaliana AT2G44840 D 0.710
ERF1A Arabidopsis thaliana AT4G17500 D 0.678
Bo1g017590 Brassica oleracea Bo1g017590 I 0.678
Bo4g024140 Brassica oleracea Bo4g024140 I 0.710
Bo4g195220 Brassica oleracea Bo4g195220 I 0.710
Bo8g049470 Brassica oleracea Bo8g049470 I 0.678
Bo9g001020 Brassica oleracea Bo9g001020 I 0.694
Bra004873 Brassica rapa Bra004873 I 0.710
Bra021047 Brassica rapa Bra021047 I 0.678
Bra021048 Brassica rapa Bra021048 I 0.678
Bra037630 Brassica rapa Bra037630 I 0.710
ATERF-1 Arabidopsis lyrata fgenesh2_kg.7__2559__AT4G17500.1 I 0.678
ATERF2 Arabidopsis lyrata fgenesh2_kg.8__70__AT5G47220.1 I 0.689
GLYMA03G26310 Glycine max GLYMA03G26310 I 0.679
GLYMA03G26437 Glycine max GLYMA03G26437 I 0.710
GLYMA03G26520 Glycine max GLYMA03G26520 I 0.723
GLYMA09G37780 Glycine max GLYMA09G37780 I 0.733
GLYMA18G48730 Glycine max GLYMA18G48730 I 0.734
MTR_7g081795 Medicago truncatula MTR_7g081795 I 0.691
MTR_7g081805 Medicago truncatula MTR_7g081805 I 0.687
MTR_7g081815 Medicago truncatula MTR_7g081815 I 0.687
MTR_8g006815 Medicago truncatula MTR_8g006815 I 0.702
MTR_8g006825 Medicago truncatula MTR_8g006825 I 0.700
MTR_8g006840 Medicago truncatula MTR_8g006840 I 0.708
POPTR_0001s11770 Populus trichocarpa POPTR_0001s11770 I 0.680
POPTR_0011s06010 Populus trichocarpa POPTR_0011s06010 I 0.698
POPTR_0014s04600 Populus trichocarpa POPTR_0014s04600 I 0.726
POPTR_0014s04610 Populus trichocarpa POPTR_0014s04610 I 0.725
POPTR_0014s04630 Populus trichocarpa POPTR_0014s04630 I 0.717
POPTR_0014s04640 Populus trichocarpa POPTR_0014s04640 I 0.730
PRUPE_ppa016903mg Prunus persica PRUPE_ppa016903mg I 0.760
PRUPE_ppa023698mg Prunus persica PRUPE_ppa023698mg I 0.701
PRUPE_ppa025748mg Prunus persica PRUPE_ppa025748mg I 0.706
PRUPE_ppb014367mg Prunus persica PRUPE_ppb014367mg I 0.760
ATERF13 Arabidopsis lyrata scaffold_403422.1 I 0.710
scaffold_604310.1 Arabidopsis lyrata scaffold_604310.1 I 0.712
TCM_005705 Theobroma cacao TCM_005705 I 0.730
TCM_005706 Theobroma cacao TCM_005706 I 0.756
TCM_005707 Theobroma cacao TCM_005707 I 0.763
VIT_10s0003g00580 Vitis vinifera VIT_10s0003g00580 I 0.681
VIT_15s0021g01630 Vitis vinifera VIT_15s0021g01630 I 0.677
Ca_02325 Cicer arietinum Ca_02325 I 0.697
Ca_06032 Cicer arietinum Ca_06032 I 0.687
Ca_06034 Cicer arietinum Ca_06034 I 0.695
Ca_17211 Cicer arietinum Ca_17211 I 0.729
Pm017696 Prunus mume Pm017696 I 0.760
Pm017698 Prunus mume Pm017698 I 0.701
Pm017699 Prunus mume Pm017699 I 0.750
Pm017700 Prunus mume Pm017700 I 0.698
29900.m001559 Ricinus communis 29900.m001559 I 0.678
30174.m008755 Ricinus communis 30174.m008755 I 0.738
30174.m008756 Ricinus communis 30174.m008756 I 0.708
30174.m008759 Ricinus communis 30174.m008759 I 0.698
cassava19881.m1 Manihot esculenta cassava19881.m1 I 0.727
cassava19882.m1 Manihot esculenta cassava19882.m1 I 0.723
cassava19883.m1 Manihot esculenta cassava19883.m1 I 0.716
cassava6588.valid.m1 Manihot esculenta cassava6588.valid.m1 I 0.681
Cucsa.255330 Cucumis sativus Cucsa.255330 I 0.695
Cucsa.260030 Cucumis sativus Cucsa.260030 I 0.687
e_gw1.60.113.1 Physcomitrella patens e_gw1.60.113.1 I 0.684
gw1.105.71.1 Physcomitrella patens gw1.105.71.1 I 0.714
mgf021215m Mimulus guttatus mgf021215m I 0.678
mgf023779m Mimulus guttatus mgf023779m I 0.707
Aquca_067_00004 Aquilegia coerulea Aquca_067_00004 I 0.678
Bostr.14547s0008 Boechera stricta Bostr.14547s0008 I 0.703
Bostr.30275s0207 Boechera stricta Bostr.30275s0207 I 0.678
Cagra.0239s0035 Capsella grandiflora Cagra.0239s0035 I 0.710
Cagra.3356s0041 Capsella grandiflora Cagra.3356s0041 I 0.678
Cagra.3675s0007 Capsella grandiflora Cagra.3675s0007 I 0.678
Cagra.4714s0001 Capsella grandiflora Cagra.4714s0001 I 0.703
Carubv10005497m.g Capsella rubella Carubv10005497m.g I 0.678
Carubv10005868m.g Capsella rubella Carubv10005868m.g I 0.703
Carubv10023967m.g Capsella rubella Carubv10023967m.g I 0.710
Carubv10027108m.g Capsella rubella Carubv10027108m.g I 0.678
Ciclev10021132m.g Citrus clementina Ciclev10021132m.g I 0.774
Ciclev10022025m.g Citrus clementina Ciclev10022025m.g I 0.797
Ciclev10022734m.g Citrus clementina Ciclev10022734m.g I 0.713
Eucgr.E01561 Eucalyptus grandis Eucgr.E01561 I 0.686
Eucgr.E01571 Eucalyptus grandis Eucgr.E01571 I 0.708
Eucgr.E02651 Eucalyptus grandis Eucgr.E02651 I 0.677
Eucgr.E03168 Eucalyptus grandis Eucgr.E03168 I 0.677
Eucgr.G00002 Eucalyptus grandis Eucgr.G00002 I 0.729
Eucgr.G00388 Eucalyptus grandis Eucgr.G00388 I 0.715
Eucgr.G00390 Eucalyptus grandis Eucgr.G00390 I 0.763
Eucgr.G00391 Eucalyptus grandis Eucgr.G00391 I 0.763
Eucgr.G00392 Eucalyptus grandis Eucgr.G00392 I 0.725
Eucgr.G00393 Eucalyptus grandis Eucgr.G00393 I 0.737
Eucgr.G00394 Eucalyptus grandis Eucgr.G00394 I 0.737
Eucgr.G00396 Eucalyptus grandis Eucgr.G00396 I 0.737
Eucgr.G00397 Eucalyptus grandis Eucgr.G00397 I 0.759
Eucgr.G00943 Eucalyptus grandis Eucgr.G00943 I 0.708
evm.TU.supercontig_101.15 Carica papaya evm.TU.supercontig_101.15 I 0.733
gene04913-v1.0-hybrid Fragaria vesca gene04913-v1.0-hybrid I 0.744
gene04916-v1.0-hybrid Fragaria vesca gene04916-v1.0-hybrid I 0.702
gene04917-v1.0-hybrid Fragaria vesca gene04917-v1.0-hybrid I 0.762
gene21165-v1.0-hybrid Fragaria vesca gene21165-v1.0-hybrid I 0.695
Gorai.004G070500 Gossypium raimondii Gorai.004G070500 I 0.781
Gorai.004G070600 Gossypium raimondii Gorai.004G070600 I 0.794
Gorai.004G070700 Gossypium raimondii Gorai.004G070700 I 0.693
Gorai.004G070800 Gossypium raimondii Gorai.004G070800 I 0.781
Gorai.004G165800 Gossypium raimondii Gorai.004G165800 I 0.708
Gorai.007G086000 Gossypium raimondii Gorai.007G086000 I 0.751
Gorai.008G108400 Gossypium raimondii Gorai.008G108400 I 0.689
Gorai.008G108500 Gossypium raimondii Gorai.008G108500 I 0.692
Gorai.009G165500 Gossypium raimondii Gorai.009G165500 I 0.684
Gorai.010G156600 Gossypium raimondii Gorai.010G156600 I 0.688
Lus10013959.g Linum usitatissimum Lus10013959.g I 0.687
Lus10016209.g Linum usitatissimum Lus10016209.g I 0.689
Lus10016210.g Linum usitatissimum Lus10016210.g I 0.699
Lus10016212.g Linum usitatissimum Lus10016212.g I 0.686
Lus10016224.g Linum usitatissimum Lus10016224.g I 0.681
Lus10025430.g Linum usitatissimum Lus10025430.g I 0.679
Lus10029318.g Linum usitatissimum Lus10029318.g I 0.681
Lus10029331.g Linum usitatissimum Lus10029331.g I 0.695
Lus10029333.g Linum usitatissimum Lus10029333.g I 0.683
Lus10042907.g Linum usitatissimum Lus10042907.g I 0.679
MDP0000122665 Malus domestica MDP0000122665 I 0.702
MDP0000133485 Malus domestica MDP0000133485 I 0.848
MDP0000135205 Malus domestica MDP0000135205 I 0.702
MDP0000153445 Malus domestica MDP0000153445 I 0.831
MDP0000178398 Malus domestica MDP0000178398 I 0.695
MDP0000189033 Malus domestica MDP0000189033 I 0.848
MDP0000317950 Malus domestica MDP0000317950 I 0.831
orange1.1g032263m.g Citrus sinensis orange1.1g032263m.g I 0.713
orange1.1g039729m.g Citrus sinensis orange1.1g039729m.g I 0.728
orange1.1g044584m.g Citrus sinensis orange1.1g044584m.g I 0.712
orange1.1g047100m.g Citrus sinensis orange1.1g047100m.g I 0.797
SapurV1A.0094s0620 Salix purpurea SapurV1A.0094s0620 I 0.680
SapurV1A.0124s0170 Salix purpurea SapurV1A.0124s0170 I 0.727
SapurV1A.0270s0240 Salix purpurea SapurV1A.0270s0240 I 0.693
SapurV1A.0816s0060 Salix purpurea SapurV1A.0816s0060 I 0.682
SapurV1A.1065s0020 Salix purpurea SapurV1A.1065s0020 I 0.680
Thhalv10001003m.g Eutrema salsugineum Thhalv10001003m.g I 0.678
Thhalv10001758m.g Eutrema salsugineum Thhalv10001758m.g I 0.710
Thhalv10029212m.g Eutrema salsugineum Thhalv10029212m.g I 0.686
chr3.CM0080.200.nd Lotus japonicus chr3.CM0080.200.nd I 0.705
chr3.CM0080.270.nc Lotus japonicus chr3.CM0080.270.nc I 0.704
chr3.CM0080.80.nd Lotus japonicus chr3.CM0080.80.nd I 0.681
LjSGA_078116.1 Lotus japonicus LjSGA_078116.1 I 0.681