CTRG_02642 (Candida tropicalis)
APSES

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF04383 (KilA-N) IPR018004 CTRG_02642 T011854_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
MBP1
M00003_2.00 		Saccharomyces cerevisiae
VACGCGWD
HWCGCGTB		 PBM
Badis et al.(2008)
MBP1_4486 		0.792 0.618
MBP1
M01514_2.00 		Saccharomyces cerevisiae
NNNNDCRCGH
DCGYGHNNNN		 PBM
Zhu et al.(2009)
Mbp1 		0.792 0.618
MBP1
M07434_2.00 		Saccharomyces cerevisiae
NDCGCGH
DCGCGHN		 PBM, CSA and or DIP-chip
Mathelier et al.(2014)
MA0329.1 		0.792 0.618
MBP1
M08472_2.00 		Saccharomyces cerevisiae
NDCGCGH
DCGCGHN		 Misc
DeBoer et al.(2011)
YDL056W_500 		0.792 0.618
estExt_fgenesh2_pg.C_10694_CONSTRUCT
M01102_2.00 		PBM CONSTRUCTS
NNACGCGW
WCGCGTNN		 PBM
Lambert et al.(2019)
pTH9838 		0.761 0.566
NCU07246
M01653_2.00 		Neurospora crassa
NDCRCGN
NCGYGHN		 PBM
Weirauch et al.(2014)
pTH8957 		0.739 0.526
ANIA_03154
M01650_2.00 		Aspergillus nidulans
NNACGCG
CGCGTNN		 PBM
Weirauch et al.(2014)
pTH8232 		0.738 0.487
NCU07587
M01654_2.00 		Neurospora crassa
NNNDCRCGN
NCGYGHNNN		 PBM
Weirauch et al.(2014)
pTH9687 		0.727 0.526
For this family, TFs with SR scores > 0.650 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
EER33824 APSES 19 97

Links

Other APSES family TFs
Other Candida tropicalis TFs

437 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AGL80 Arabidopsis thaliana AT5G48670 D
Al_scaffold_0003_569 Arabidopsis lyrata Al_scaffold_0003_569 I
Bo2g104810 Brassica oleracea Bo2g104810 I
Bo5g145000 Brassica oleracea Bo5g145000 I
Bo9g078450 Brassica oleracea Bo9g078450 I
Bra018490 Brassica rapa Bra018490 I
Bra029469 Brassica rapa Bra029469 I
Bra041022 Brassica rapa Bra041022 I
GLYMA11G33460 Glycine max GLYMA11G33460 I
GLYMA18G04760 Glycine max GLYMA18G04760 I
GSMUA_Achr3G05500_001 Musa acuminata GSMUA_Achr3G05500_001 I
MTR_3g065100 Medicago truncatula MTR_3g065100 I
POPTR_0005s00420 Populus trichocarpa POPTR_0005s00420 I
POPTR_0013s00350 Populus trichocarpa POPTR_0013s00350 I
POPTR_0013s01880 Populus trichocarpa POPTR_0013s01880 I
PRUPE_ppa018168mg Prunus persica PRUPE_ppa018168mg I
PRUPE_ppa019749mg Prunus persica PRUPE_ppa019749mg I
Solyc01g102260.2 Solanum lycopersicum Solyc01g102260.2 I
TCM_025670 Theobroma cacao TCM_025670 I
TCM_025671 Theobroma cacao TCM_025671 I
TCM_026842 Theobroma cacao TCM_026842 I
TCM_026845 Theobroma cacao TCM_026845 I
VIT_14s0060g00300 Vitis vinifera VIT_14s0060g00300 I
Ca_06495 Cicer arietinum Ca_06495 I
Ca_08934 Cicer arietinum Ca_08934 I
Ca_13275 Cicer arietinum Ca_13275 I
Cla005226 Citrullus lanatus Cla005226 I
Cla009163 Citrullus lanatus Cla009163 I
Pm003257 Prunus mume Pm003257 I
Pm004396 Prunus mume Pm004396 I
30128.m008984 Ricinus communis 30128.m008984 I
30199.m000879 Ricinus communis 30199.m000879 I
cassava15247.m1 Manihot esculenta cassava15247.m1 I
cassava19828.m1 Manihot esculenta cassava19828.m1 I
Cucsa.050930 Cucumis sativus Cucsa.050930 I
mgf026186m Mimulus guttatus mgf026186m I
Aquca_007_00647 Aquilegia coerulea Aquca_007_00647 I
Aquca_027_00068 Aquilegia coerulea Aquca_027_00068 I
Bostr.2392s0039 Boechera stricta Bostr.2392s0039 I
Bostr.2570s0082 Boechera stricta Bostr.2570s0082 I
Cagra.1772s0003 Capsella grandiflora Cagra.1772s0003 I
Carubv10014232m.g Capsella rubella Carubv10014232m.g I
Ciclev10006519m.g Citrus clementina Ciclev10006519m.g I
Ciclev10013728m.g Citrus clementina Ciclev10013728m.g I
Ciclev10024463m.g Citrus clementina Ciclev10024463m.g I
Eucgr.B01824 Eucalyptus grandis Eucgr.B01824 I
Eucgr.E01733 Eucalyptus grandis Eucgr.E01733 I
Eucgr.E01734 Eucalyptus grandis Eucgr.E01734 I
Eucgr.E01736 Eucalyptus grandis Eucgr.E01736 I
Eucgr.E01737 Eucalyptus grandis Eucgr.E01737 I
evm.TU.contig_24608 Carica papaya evm.TU.contig_24608 I
evm.TU.contig_25049.1 Carica papaya evm.TU.contig_25049.1 I
evm.TU.contig_25049.5 Carica papaya evm.TU.contig_25049.5 I
evm.TU.contig_25253.5 Carica papaya evm.TU.contig_25253.5 I
evm.TU.contig_25982.2 Carica papaya evm.TU.contig_25982.2 I
evm.TU.contig_26058.1 Carica papaya evm.TU.contig_26058.1 I
evm.TU.contig_26058.2 Carica papaya evm.TU.contig_26058.2 I
evm.TU.contig_27586 Carica papaya evm.TU.contig_27586 I
evm.TU.contig_28448.4 Carica papaya evm.TU.contig_28448.4 I
evm.TU.contig_31147 Carica papaya evm.TU.contig_31147 I
evm.TU.contig_32899.1 Carica papaya evm.TU.contig_32899.1 I
evm.TU.contig_33457.2 Carica papaya evm.TU.contig_33457.2 I
evm.TU.contig_35009 Carica papaya evm.TU.contig_35009 I
evm.TU.contig_35265 Carica papaya evm.TU.contig_35265 I
evm.TU.contig_36181 Carica papaya evm.TU.contig_36181 I
evm.TU.contig_37084 Carica papaya evm.TU.contig_37084 I
evm.TU.contig_38146 Carica papaya evm.TU.contig_38146 I
evm.TU.contig_40008 Carica papaya evm.TU.contig_40008 I
evm.TU.contig_40485 Carica papaya evm.TU.contig_40485 I
evm.TU.contig_40499.2 Carica papaya evm.TU.contig_40499.2 I
evm.TU.contig_43368 Carica papaya evm.TU.contig_43368 I
evm.TU.contig_44957 Carica papaya evm.TU.contig_44957 I
evm.TU.supercontig_117.18 Carica papaya evm.TU.supercontig_117.18 I
evm.TU.supercontig_117.19 Carica papaya evm.TU.supercontig_117.19 I
evm.TU.supercontig_118.30 Carica papaya evm.TU.supercontig_118.30 I
evm.TU.supercontig_1237.1 Carica papaya evm.TU.supercontig_1237.1 I
evm.TU.supercontig_139.40 Carica papaya evm.TU.supercontig_139.40 I
evm.TU.supercontig_1750.1 Carica papaya evm.TU.supercontig_1750.1 I
evm.TU.supercontig_1750.2 Carica papaya evm.TU.supercontig_1750.2 I
evm.TU.supercontig_185.11 Carica papaya evm.TU.supercontig_185.11 I
evm.TU.supercontig_185.2 Carica papaya evm.TU.supercontig_185.2 I
evm.TU.supercontig_185.7 Carica papaya evm.TU.supercontig_185.7 I
evm.TU.supercontig_185.9 Carica papaya evm.TU.supercontig_185.9 I
evm.TU.supercontig_265.1 Carica papaya evm.TU.supercontig_265.1 I
evm.TU.supercontig_30.166 Carica papaya evm.TU.supercontig_30.166 I
gene18029-v1.0-hybrid Fragaria vesca gene18029-v1.0-hybrid I
gene22916-v1.0-hybrid Fragaria vesca gene22916-v1.0-hybrid I
gene22967-v1.0-hybrid Fragaria vesca gene22967-v1.0-hybrid I
gene23924-v1.0-hybrid Fragaria vesca gene23924-v1.0-hybrid I
Gorai.004G292000 Gossypium raimondii Gorai.004G292000 I
Gorai.013G210200 Gossypium raimondii Gorai.013G210200 I
Lus10014883.g Linum usitatissimum Lus10014883.g I
Lus10022316.g Linum usitatissimum Lus10022316.g I
Lus10032108.g Linum usitatissimum Lus10032108.g I
MDP0000123878 Malus domestica MDP0000123878 I
MDP0000726295 Malus domestica MDP0000726295 I
MDP0000846004 Malus domestica MDP0000846004 I
MDP0000925348 Malus domestica MDP0000925348 I
orange1.1g040642m.g Citrus sinensis orange1.1g040642m.g I
SapurV1A.0066s0310 Salix purpurea SapurV1A.0066s0310 I
SapurV1A.0442s0180 Salix purpurea SapurV1A.0442s0180 I
SapurV1A.0442s0190 Salix purpurea SapurV1A.0442s0190 I
Thhalv10012000m.g Eutrema salsugineum Thhalv10012000m.g I
Thhalv10022373m.g Eutrema salsugineum Thhalv10022373m.g I
Thhalv10023873m.g Eutrema salsugineum Thhalv10023873m.g I
Thhalv10024119m.g Eutrema salsugineum Thhalv10024119m.g I
Thhalv10024162m.g Eutrema salsugineum Thhalv10024162m.g I
chr6.LjT19B22.120.nd Lotus japonicus chr6.LjT19B22.120.nd I
LjSGA_018236.1 Lotus japonicus LjSGA_018236.1 I
LjSGA_042497.2 Lotus japonicus LjSGA_042497.2 I
LjSGA_057783.1 Lotus japonicus LjSGA_057783.1 I
LjSGA_104570.1 Lotus japonicus LjSGA_104570.1 I
LjSGA_107301.1 Lotus japonicus LjSGA_107301.1 I
LjSGA_126766.1 Lotus japonicus LjSGA_126766.1 I
LjSGA_147985.1 Lotus japonicus LjSGA_147985.1 I
LjT40B16.70.nc Lotus japonicus LjT40B16.70.nc I
GLYMA18G05916 Glycine max GLYMA18G05916 N
GLYMA18G05990 Glycine max GLYMA18G05990 N
GSMUA_Achr2G18400_001 Musa acuminata GSMUA_Achr2G18400_001 N
GSMUA_Achr3G08500_001 Musa acuminata GSMUA_Achr3G08500_001 N
Pm003258 Prunus mume Pm003258 N
evm.TU.contig_24864.1 Carica papaya evm.TU.contig_24864.1 N
evm.TU.contig_25049.2 Carica papaya evm.TU.contig_25049.2 N
evm.TU.contig_25253.1 Carica papaya evm.TU.contig_25253.1 N
evm.TU.contig_25253.2 Carica papaya evm.TU.contig_25253.2 N
evm.TU.contig_28448.1 Carica papaya evm.TU.contig_28448.1 N
evm.TU.contig_35762 Carica papaya evm.TU.contig_35762 N
evm.TU.contig_38760 Carica papaya evm.TU.contig_38760 N
evm.TU.contig_40164 Carica papaya evm.TU.contig_40164 N
evm.TU.contig_46342 Carica papaya evm.TU.contig_46342 N
evm.TU.supercontig_135.3 Carica papaya evm.TU.supercontig_135.3 N
evm.TU.supercontig_185.8 Carica papaya evm.TU.supercontig_185.8 N
evm.TU.supercontig_22.66 Carica papaya evm.TU.supercontig_22.66 N
evm.TU.supercontig_265.6 Carica papaya evm.TU.supercontig_265.6 N
evm.TU.supercontig_30.163 Carica papaya evm.TU.supercontig_30.163 N
evm.TU.supercontig_30.164 Carica papaya evm.TU.supercontig_30.164 N
Gorai.003G105500 Gossypium raimondii Gorai.003G105500 N
Gorai.004G229700 Gossypium raimondii Gorai.004G229700 N
Lus10022325.g Linum usitatissimum Lus10022325.g N
PDK_20s1688321g001 Phoenix dactylifera PDK_20s1688321g001 N