ARID3B (Canis familiaris)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01388 (ARID) IPR001606 ENSCAFG00000017932 T014458_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
Arid3b
M01659_2.00 		Mus musculus
NNDATTAAWWN
NWWTTAATHNN		 PBM
Weirauch et al.(2014)
pTH4425 		0.785 1.000
ARID3A
M01658_2.00 		Microcebus murinus
NDATHAWDN
NHWTDATHN		 PBM
Weirauch et al.(2014)
pTH9214 		0.695 0.895
Arid3a
M00115_2.00 		Mus musculus
NDATHADDN
NHHTDATHN		 PBM
Badis et al.(2009)
Arid3a_3875 		0.695 0.895
Arid3a
M01660_2.00 		Mus musculus
NDATHAADN
NHTTDATHN		 PBM
Weirauch et al.(2014)
pTH5169 		0.695 0.895
ARID3A
M01662_2.00 		Procavia capensis
NNATHDNNN
NNNHDATNN		 PBM
Weirauch et al.(2014)
pTH9384 		0.695 0.895
Arid3a
M02651_2.00 		Mus musculus
ATYAAA
TTTRAT		 SELEX
Mathelier et al.(2014)
MA0151.1 		0.695 0.895
ARID3A
M09766_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DRI1_01 		0.695 0.895
DDB_G0275333
M01656_2.00 		Dictyostelium discoideum
NNATHDNNNN
NNNNHDATNN		 PBM
Weirauch et al.(2014)
pTH5168 		0.675 0.488
cfi-1
M01667_2.00 		Caenorhabditis elegans
NNATHDNN
NNHDATNN		 PBM
Weirauch et al.(2014)
pTH5118 		0.657 0.756
retn
M01664_2.00 		Drosophila melanogaster
NDATHRNN
NNYDATHN		 PBM
Weirauch et al.(2014)
pTH5119 		0.644 0.791
retn
M03590_2.00 		Drosophila melanogaster
NNATTRATHN
NDATYAATNN		 SELEX
Nitta et al.(2015)
retn_1 		0.644 0.791
retn
M05899_2.00 		Drosophila melanogaster
AATYAAAM
KTTTRATT		 B1H
Zhu et al.(2011)
retn_SANGER_5_FBgn0004795 		0.644 0.791
retn
M09768_2.00 		Drosophila melanogaster
NNRATTAADN
NHTTAATYNN		 Transfac
Matys et al.(2006)
I$DRI_01 		0.644 0.791
ACYPI009013
M01655_2.00 		Acyrthosiphon pisum
NDATHAADN
NHTTDATHN		 PBM
Weirauch et al.(2014)
pTH5117 		0.621 0.686
GSPATT00004674001
M01665_2.00 		Paramecium tetraurelia
NNATYHNN
NNDRATNN		 PBM
Weirauch et al.(2014)
pTH5124 		0.508 0.419
TTHERM_00243900
M01666_2.00 		Tetrahymena thermophila
NDDATYANN
NNTRATHHN		 PBM
Weirauch et al.(2014)
pTH5128 		0.508 0.372
For this family, TFs with SR scores > 0.422 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSCAFP00000026472 ARID/BRIGHT 218 304

Links

Other ARID/BRIGHT family TFs
Other Canis familiaris TFs

364 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
WUBG_18983 Wuchereria bancrofti WUBG_18983 N 0.000
ENSAPLG00000008726 Anas platyrhynchos ENSAPLG00000008726 N 0.000
GD16116 Drosophila simulans FBgn0187752 N 0.000
LOAG_15011 Loa loa LOAG_15011 N 0.000
Afo_R014138 Aptenodytes forsteri Afo_R014138 N 0.000
Myotis_brandtii_TBX4_10031053 Myotis brandtii Myotis_brandtii_TBX4_10031053 N 0.000
Minc08191 Meloidogyne incognita Minc08191 N 0.000
BTMF_0001726401 Brugia timori BTMF_0001726401 N 0.000
DILT_0001768201 Diphyllobothrium latum DILT_0001768201 N 0.000
GPUH_0002705801 Gongylonema pulchrum GPUH_0002705801 N 0.000
PEQ_0001168701 Parascaris equorum PEQ_0001168701 N 0.000
SMTD_0000415401 Schistosoma mattheei SMTD_0000415401 N 0.000
SPER_0000972801 Spirometra erinaceieuropaei SPER_0000972801 N 0.000
TCNE_0001513701 Toxocara canis TCNE_0001513701 N 0.000
TTAC_0001078801 Hydatigera taeniaeformis TTAC_0001078801 N 0.000