CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ARID5A
(
Microcebus murinus
)
ARID/BRIGHT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF01388 (ARID)
IPR001606
ENSMICG00000001964
T014611_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Arid5a
M00116_2.00
Mus musculus
NHAATATTDNN
NNHAATATTDN
PBM
Badis et al.(2009)
Arid5a_3770
0.288
1.000
Arid5a
M01663_2.00
Rattus norvegicus
NNNRWATHNN
NNDATWYNNN
PBM
Weirauch et al.(2014)
pTH5121
0.288
1.000
For this family, TFs with SR scores >
0.422
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMICP00000001790
ARID/BRIGHT
55
108
EEQAFLVSLYKFMKERHTPIERVPHLGFKQINLWKIYKAVEKLGAYELXXXXXX
Links
Other
ARID/BRIGHT
family TFs
Other
Microcebus murinus
TFs
73 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
DAPPUDRAFT_51670
Daphnia pulex
DAPPUDRAFT_51670
N
0.000
RPRC004634
Rhodnius prolixus
RPRC004634
N
0.000
SMAR010354
Strigamia maritima
SMAR010354
N
0.000