ENSPFOG00000002717 (Poecilia formosa)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01388 (ARID) IPR001606 ENSPFOG00000002717 T014714_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARID3A
M01658_2.00 		Microcebus murinus
NDATHAWDN
NHWTDATHN		 PBM
Weirauch et al.(2014)
pTH9214 		0.771 0.977
Arid3a
M00115_2.00 		Mus musculus
NDATHADDN
NHHTDATHN		 PBM
Badis et al.(2009)
Arid3a_3875 		0.771 0.977
Arid3a
M01660_2.00 		Mus musculus
NDATHAADN
NHTTDATHN		 PBM
Weirauch et al.(2014)
pTH5169 		0.771 0.977
Arid3a
M02651_2.00 		Mus musculus
ATYAAA
TTTRAT		 SELEX
Mathelier et al.(2014)
MA0151.1 		0.771 0.977
ARID3A
M09766_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DRI1_01 		0.771 0.977
ARID3A
M01662_2.00 		Procavia capensis
NNATHDNNN
NNNHDATNN		 PBM
Weirauch et al.(2014)
pTH9384 		0.771 0.965
cfi-1
M01667_2.00 		Caenorhabditis elegans
NNATHDNN
NNHDATNN		 PBM
Weirauch et al.(2014)
pTH5118 		0.733 0.791
retn
M01664_2.00 		Drosophila melanogaster
NDATHRNN
NNYDATHN		 PBM
Weirauch et al.(2014)
pTH5119 		0.720 0.849
retn
M03590_2.00 		Drosophila melanogaster
NNATTRATHN
NDATYAATNN		 SELEX
Nitta et al.(2015)
retn_1 		0.720 0.849
retn
M05899_2.00 		Drosophila melanogaster
AATYAAAM
KTTTRATT		 B1H
Zhu et al.(2011)
retn_SANGER_5_FBgn0004795 		0.720 0.849
retn
M09768_2.00 		Drosophila melanogaster
NNRATTAADN
NHTTAATYNN		 Transfac
Matys et al.(2006)
I$DRI_01 		0.720 0.849
Arid3b
M01659_2.00 		Mus musculus
NNDATTAAWWN
NWWTTAATHNN		 PBM
Weirauch et al.(2014)
pTH4425 		0.709 0.919
DDB_G0275333
M01656_2.00 		Dictyostelium discoideum
NNATHDNNNN
NNNNHDATNN		 PBM
Weirauch et al.(2014)
pTH5168 		0.707 0.500
ACYPI009013
M01655_2.00 		Acyrthosiphon pisum
NDATHAADN
NHTTDATHN		 PBM
Weirauch et al.(2014)
pTH5117 		0.697 0.709
GSPATT00004674001
M01665_2.00 		Paramecium tetraurelia
NNATYHNN
NNDRATNN		 PBM
Weirauch et al.(2014)
pTH5124 		0.540 0.419
TTHERM_00243900
M01666_2.00 		Tetrahymena thermophila
NDDATYANN
NNTRATHHN		 PBM
Weirauch et al.(2014)
pTH5128 		0.508 0.372
For this family, TFs with SR scores > 0.422 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSPFOP00000002676 ARID/BRIGHT 212 298

Links

Other ARID/BRIGHT family TFs
Other Poecilia formosa TFs

368 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
qa-1F Neurospora crassa NCU06028 D 0.000
PODANS_5_5100 Podospora anserina PODANS_5_5100 I 0.000
fgenesh1_pg.C_scaffold_40000014 Mycosphaerella fijiensis fgenesh1_pg.C_scaffold_40000014 I 0.000
estExt_Genewise1Plus.C_50594 Cochliobolus heterostrophus C5 estExt_Genewise1Plus.C_50594 I 0.000
estExt_Genewise1.C_80993 Neurospora discreta estExt_Genewise1.C_80993 I 0.000
W97_04550 Coniosporium apollinis W97_04550 I 0.000
VDBG_08512 Verticillium alfalfae VDBG_08512 I 0.000
VDAG_08177 Verticillium dahliae VDAG_08177 I 0.000
UCRNP2_4108 Neofusicoccum parvum UCRNP2_4108 I 0.000
THITE_2116895 Thielavia terrestris THITE_2116895 I 0.000
SPBR_06572 Sporothrix brasiliensis SPBR_06572 I 0.000
SMAC_07407 Sordaria macrospora SMAC_07407 I 0.000
SETTUDRAFT_140992 Setosphaeria turcica SETTUDRAFT_140992 I 0.000
SEPMUDRAFT_150184 Sphaerulina musiva SEPMUDRAFT_150184 I 0.000
PVAR5_3766 Byssochlamys spectabilis PVAR5_3766 I 0.000
PTT_06800 Pyrenophora teres PTT_06800 I 0.000
VDBG_08512 Verticillium albo atrum VDBG_08512 I 0.000
PFICI_15081 Pestalotiopsis fici PFICI_15081 I 0.000
OIDMADRAFT_52514 Oidiodendron maius OIDMADRAFT_52514 I 0.000
NEUTE1DRAFT_147986 Neurospora tetrasperma NEUTE1DRAFT_147986 I 0.000
MYCTH_2067244 Myceliophthora thermophila MYCTH_2067244 I 0.000
MPH_01982 Macrophomina phaseolina MPH_01982 I 0.000
MGG_07777 Magnaporthe oryzae MGG_07777 I 0.000
MAPG_07478 Magnaporthe poae MAPG_07478 I 0.000
LEMA_P062270.1 Leptosphaeria maculans LEMA_P062270.1 I 0.000
GLRG_07125 Colletotrichum graminicola GLRG_07125 I 0.000
GGTG_00383 Gaeumannomyces graminis GGTG_00383 I 0.000
F503_06755 Ophiostoma piceae uamh F503_06755 I 0.000
COCVIDRAFT_27956 Bipolaris victoriae COCVIDRAFT_27956 I 0.000
COCCADRAFT_5667 Bipolaris zeicola COCCADRAFT_5667 I 0.000
A1O1_04840 Capronia coronata A1O1_04840 N 0.000