GSMUA_Achr3G11660_001 (Musa acuminata)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01388 (ARID) IPR001606 GSMUA_Achr3G11660_001 T015028_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARID3
M06695_2.00 		Arabidopsis thaliana
AAWWHNAAATYAAWW
WWTTRATTTNDWWTT		 Dap-seq
OMalley et al.(2016)
AT2G17410_col_a 		0.590 0.616
ARID6
M06694_2.00 		Arabidopsis thaliana
HAATTRAWTTN
NAAWTYAATTD		 Dap-seq
OMalley et al.(2016)
AT1G20910_col_a 		0.500 0.593
For this family, TFs with SR scores > 0.422 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
GSMUA_Achr3P11660_001 ARID/BRIGHT 181 266

Links

Other ARID/BRIGHT family TFs
Other Musa acuminata TFs

151 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
L893_g18993 Steinernema glaseri L893_g18993 I 0.000
L889_g6792 Steinernema feltiae L889_g6792 I 0.000
L889_g6804 Steinernema feltiae L889_g6804 I 0.000
L889_g8185 Steinernema feltiae L889_g8185 I 0.000
L892_g10843 Steinernema scapterisci L892_g10843 I 0.000
L892_g14818 Steinernema scapterisci L892_g14818 I 0.000
L892_g14825 Steinernema scapterisci L892_g14825 I 0.000
L892_g2780 Steinernema scapterisci L892_g2780 I 0.000
L893_g18992 Steinernema glaseri L893_g18992 I 0.000
CBG20729 Caenorhabditis briggsae CBG20729 I 0.000
L893_g27930 Steinernema glaseri L893_g27930 I 0.000
L898_g12799 Steinernema monticolum L898_g12799 I 0.000
L898_g19021 Steinernema monticolum L898_g19021 I 0.000
L898_g20180 Steinernema monticolum L898_g20180 I 0.000
L898_g21763 Steinernema monticolum L898_g21763 I 0.000
L898_g3515 Steinernema monticolum L898_g3515 I 0.000
L898_g4012 Steinernema monticolum L898_g4012 I 0.000
L889_g6694 Steinernema feltiae L889_g6694 I 0.000
CBG20727 Caenorhabditis briggsae CBG20727 I 0.000
CBN13569 Caenorhabditis brenneri CBN13569 I 0.000
CBN23838 Caenorhabditis brenneri CBN23838 I 0.000
CRE15644 Caenorhabditis remanei CRE15644 I 0.000
CRE15675 Caenorhabditis remanei CRE15675 I 0.000
nhr-170 Caenorhabditis elegans WBGene00008309 I 0.000
nhr-231 Caenorhabditis elegans WBGene00012449 I 0.000
L596_g14532 Steinernema carpocapsae L596_g14532 I 0.000
L596_g14537 Steinernema carpocapsae L596_g14537 I 0.000
L596_g14590 Steinernema carpocapsae L596_g14590 I 0.000
L596_g14596 Steinernema carpocapsae L596_g14596 I 0.000
L889_g6692 Steinernema feltiae L889_g6692 I 0.000
L889_g6695 Steinernema feltiae L889_g6695 I 0.000
L596_g14541 Steinernema carpocapsae L596_g14541 N 0.000
L596_g14578 Steinernema carpocapsae L596_g14578 N 0.000
L898_g32142 Steinernema monticolum L898_g32142 N 0.000
L889_g6806 Steinernema feltiae L889_g6806 N 0.000
L898_g4015 Steinernema monticolum L898_g4015 N 0.000