HelroG122964 (Helobdella robusta)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01388 (ARID) IPR001606 HelroG122964 T015056_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARID3A
M01658_2.00 		Microcebus murinus
NDATHAWDN
NHWTDATHN		 PBM
Weirauch et al.(2014)
pTH9214 		0.719 0.860
Arid3a
M00115_2.00 		Mus musculus
NDATHADDN
NHHTDATHN		 PBM
Badis et al.(2009)
Arid3a_3875 		0.719 0.860
Arid3a
M01660_2.00 		Mus musculus
NDATHAADN
NHTTDATHN		 PBM
Weirauch et al.(2014)
pTH5169 		0.719 0.860
Arid3a
M02651_2.00 		Mus musculus
ATYAAA
TTTRAT		 SELEX
Mathelier et al.(2014)
MA0151.1 		0.719 0.860
ARID3A
M09766_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DRI1_01 		0.719 0.860
ARID3A
M01662_2.00 		Procavia capensis
NNATHDNNN
NNNHDATNN		 PBM
Weirauch et al.(2014)
pTH9384 		0.719 0.849
Arid3b
M01659_2.00 		Mus musculus
NNDATTAAWWN
NWWTTAATHNN		 PBM
Weirauch et al.(2014)
pTH4425 		0.701 0.814
DDB_G0275333
M01656_2.00 		Dictyostelium discoideum
NNATHDNNNN
NNNNHDATNN		 PBM
Weirauch et al.(2014)
pTH5168 		0.699 0.488
cfi-1
M01667_2.00 		Caenorhabditis elegans
NNATHDNN
NNHDATNN		 PBM
Weirauch et al.(2014)
pTH5118 		0.682 0.779
retn
M01664_2.00 		Drosophila melanogaster
NDATHRNN
NNYDATHN		 PBM
Weirauch et al.(2014)
pTH5119 		0.668 0.802
retn
M03590_2.00 		Drosophila melanogaster
NNATTRATHN
NDATYAATNN		 SELEX
Nitta et al.(2015)
retn_1 		0.668 0.802
retn
M05899_2.00 		Drosophila melanogaster
AATYAAAM
KTTTRATT		 B1H
Zhu et al.(2011)
retn_SANGER_5_FBgn0004795 		0.668 0.802
retn
M09768_2.00 		Drosophila melanogaster
NNRATTAADN
NHTTAATYNN		 Transfac
Matys et al.(2006)
I$DRI_01 		0.668 0.802
ACYPI009013
M01655_2.00 		Acyrthosiphon pisum
NDATHAADN
NHTTDATHN		 PBM
Weirauch et al.(2014)
pTH5117 		0.645 0.663
GSPATT00004674001
M01665_2.00 		Paramecium tetraurelia
NNATYHNN
NNDRATNN		 PBM
Weirauch et al.(2014)
pTH5124 		0.532 0.372
TTHERM_00243900
M01666_2.00 		Tetrahymena thermophila
NDDATYANN
NNTRATHHN		 PBM
Weirauch et al.(2014)
pTH5128 		0.499 0.337
For this family, TFs with SR scores > 0.422 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
HelroP122964 ARID/BRIGHT 20 106

Links

Other ARID/BRIGHT family TFs
Other Helobdella robusta TFs

367 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ENSPVAG00000015152 Pteropus vampyrus ENSPVAG00000015152 N 0.000
ENSNLEG00000003009 Nomascus leucogenys ENSNLEG00000003009 N 0.000
TCF23 Ornithorhynchus anatinus ENSOANG00000003936 N 0.000
ENSOARG00000019168 Ovis aries ENSOARG00000019168 N 0.000
ENSOCUG00000008655 Oryctolagus cuniculus ENSOCUG00000008655 N 0.000
TCF23 Otolemur garnettii ENSOGAG00000006528 N 0.000
ENSOPRG00000010556 Ochotona princeps ENSOPRG00000010556 N 0.000
ENSPANG00000009856 Papio anubis ENSPANG00000009856 N 0.000
ENSPPYG00000012560 Pongo abelii ENSPPYG00000012560 N 0.000
TCF23 Pan troglodytes ENSPTRG00000011753 N 0.000
Tcf23 Mus musculus ENSMUSG00000006642 N 0.000
Tcf23 Rattus norvegicus ENSRNOG00000025736 N 0.000
ENSSHAG00000012462 Sarcophilus harrisii ENSSHAG00000012462 N 0.000
TCF23 Sus scrofa ENSSSCG00000027409 N 0.000
ENSSTOG00000015523 Ictidomys tridecemlineatus ENSSTOG00000015523 N 0.000
TCF23 Tursiops truncatus ENSTTRG00000005255 N 0.000
Cmyd_10002847 Chelonia mydas Cmyd_10002847 N 0.000
ENSP00000296096-D1 Bos grunniens ENSP00000296096-D1 N 0.000
ENSP00000296096 Macaca fascicularis ENSP00000296096 N 0.000
Myotis_brandtii_TCF23_10031193 Myotis brandtii Myotis_brandtii_TCF23_10031193 N 0.000
TCF23 Erinaceus europaeus ENSEEUG00000007250 N 0.000
TCF23 Bos taurus ENSBTAG00000014813 N 0.000
TCF23 Canis familiaris ENSCAFG00000030192 N 0.000
TCF23 Choloepus hoffmanni ENSCHOG00000004803 N 0.000
TCF23 Callithrix jacchus ENSCJAG00000001198 N 0.000
ENSCPOG00000003785 Cavia porcellus ENSCPOG00000003785 N 0.000
ENSCSAG00000009631 Chlorocebus sabaeus ENSCSAG00000009631 N 0.000
ENSDNOG00000030981 Dasypus novemcinctus ENSDNOG00000030981 N 0.000
Tcf23 Dipodomys ordii ENSDORG00000014403 N 0.000
TCF23 Equus caballus ENSECAG00000021374 N 0.000
ENSAMEG00000001827 Ailuropoda melanoleuca ENSAMEG00000001827 N 0.000
TCF23 Felis catus ENSFCAG00000022795 N 0.000
TCF23 Homo sapiens ENSG00000163792 N 0.000
TCF23 Gorilla gorilla ENSGGOG00000002612 N 0.000
TCF23 Loxodonta africana ENSLAFG00000014587 N 0.000
ENSLOCG00000015901 Lepisosteus oculatus ENSLOCG00000015901 N 0.000
ENSMEUG00000010665 Macropus eugenii ENSMEUG00000010665 N 0.000
TCF23 Microcebus murinus ENSMICG00000017064 N 0.000
TCF23 Macaca mulatta ENSMMUG00000015867 N 0.000
TCF23 Monodelphis domestica ENSMODG00000015714 N 0.000