PGSC0003DMG400010001 (Solanum tuberosum)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01388 (ARID) IPR001606 PGSC0003DMG400010001 T015422_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARID3
M06695_2.00 		Arabidopsis thaliana
AAWWHNAAATYAAWW
WWTTRATTTNDWWTT		 Dap-seq
OMalley et al.(2016)
AT2G17410_col_a 		0.681 0.825
ARID6
M06694_2.00 		Arabidopsis thaliana
HAATTRAWTTN
NAAWTYAATTD		 Dap-seq
OMalley et al.(2016)
AT1G20910_col_a 		0.672 0.762
For this family, TFs with SR scores > 0.422 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
PGSC0003DMT400025905 ARID/BRIGHT 1 81

Links

Other ARID/BRIGHT family TFs
Other Solanum tuberosum TFs

153 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZNF202 Homo sapiens ENSG00000166261 D 0.000
ENSOARG00000000770 Ovis aries ENSOARG00000000770 I 0.000
ENSP00000337724 Macaca fascicularis ENSP00000337724 I 0.000
ENSBTAP00000022184-D1 Bos grunniens ENSBTAP00000022184-D1 I 0.000
ZNF202 Vicugna pacos ENSVPAG00000004840 I 0.000
ZNF202 Tursiops truncatus ENSTTRG00000011530 I 0.000
ENSTSYG00000010154 Tarsius syrichta ENSTSYG00000010154 I 0.000
ZNF202 Tupaia belangeri ENSTBEG00000011372 I 0.000
ENSSTOG00000027536 Ictidomys tridecemlineatus ENSSTOG00000027536 I 0.000
ZNF202 Sus scrofa ENSSSCG00000015145 I 0.000
ENSSHAG00000009268 Sarcophilus harrisii ENSSHAG00000009268 I 0.000
ZNF202 Pan troglodytes ENSPTRG00000004409 I 0.000
ENSPPYG00000003989 Pongo abelii ENSPPYG00000003989 I 0.000
ENSPANG00000004921 Papio anubis ENSPANG00000004921 I 0.000
ZNF202 Otolemur garnettii ENSOGAG00000026373 I 0.000
ZNF202 Oryctolagus cuniculus ENSOCUG00000014264 I 0.000
ZNF202 Bos taurus ENSBTAG00000016684 I 0.000
ENSMPUG00000005930 Mustela putorius furo ENSMPUG00000005930 I 0.000
ZNF202 Monodelphis domestica ENSMODG00000012927 I 0.000
ZNF202 Macaca mulatta ENSMMUG00000010646 I 0.000
ZNF202 Microcebus murinus ENSMICG00000007659 I 0.000
ZNF202 Loxodonta africana ENSLAFG00000008599 I 0.000
ZNF202 Gorilla gorilla ENSGGOG00000006891 I 0.000
ZNF202 Equus caballus ENSECAG00000024393 I 0.000
ZNF202 Dasypus novemcinctus ENSDNOG00000031856 I 0.000
ENSCSAG00000002403 Chlorocebus sabaeus ENSCSAG00000002403 I 0.000
ZNF202 Callithrix jacchus ENSCJAG00000007782 I 0.000
ZNF202 Choloepus hoffmanni ENSCHOG00000007537 I 0.000
ZNF202 Canis familiaris ENSCAFG00000011509 I 0.000
ZNF202 Felis catus ENSFCAG00000001471 N 0.000