TC008720 (Tribolium castaneum)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF01388 (ARID) IPR001606 TC008720 T015679_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
retn
M01664_2.00 		Drosophila melanogaster
NDATHRNN
NNYDATHN		 PBM
Weirauch et al.(2014)
pTH5119 		0.785 1.000
retn
M03590_2.00 		Drosophila melanogaster
NNATTRATHN
NDATYAATNN		 SELEX
Nitta et al.(2015)
retn_1 		0.785 1.000
retn
M05899_2.00 		Drosophila melanogaster
AATYAAAM
KTTTRATT		 B1H
Zhu et al.(2011)
retn_SANGER_5_FBgn0004795 		0.785 1.000
retn
M09768_2.00 		Drosophila melanogaster
NNRATTAADN
NHTTAATYNN		 Transfac
Matys et al.(2006)
I$DRI_01 		0.785 1.000
ACYPI009013
M01655_2.00 		Acyrthosiphon pisum
NDATHAADN
NHTTDATHN		 PBM
Weirauch et al.(2014)
pTH5117 		0.762 0.756
ARID3A
M01658_2.00 		Microcebus murinus
NDATHAWDN
NHWTDATHN		 PBM
Weirauch et al.(2014)
pTH9214 		0.706 0.837
Arid3a
M00115_2.00 		Mus musculus
NDATHADDN
NHHTDATHN		 PBM
Badis et al.(2009)
Arid3a_3875 		0.706 0.837
Arid3a
M01660_2.00 		Mus musculus
NDATHAADN
NHTTDATHN		 PBM
Weirauch et al.(2014)
pTH5169 		0.706 0.837
Arid3a
M02651_2.00 		Mus musculus
ATYAAA
TTTRAT		 SELEX
Mathelier et al.(2014)
MA0151.1 		0.706 0.837
ARID3A
M09766_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$DRI1_01 		0.706 0.837
ARID3A
M01662_2.00 		Procavia capensis
NNATHDNNN
NNNHDATNN		 PBM
Weirauch et al.(2014)
pTH9384 		0.706 0.826
cfi-1
M01667_2.00 		Caenorhabditis elegans
NNATHDNN
NNHDATNN		 PBM
Weirauch et al.(2014)
pTH5118 		0.682 0.733
DDB_G0275333
M01656_2.00 		Dictyostelium discoideum
NNATHDNNNN
NNNNHDATNN		 PBM
Weirauch et al.(2014)
pTH5168 		0.670 0.512
Arid3b
M01659_2.00 		Mus musculus
NNDATTAAWWN
NWWTTAATHNN		 PBM
Weirauch et al.(2014)
pTH4425 		0.644 0.791
GSPATT00004674001
M01665_2.00 		Paramecium tetraurelia
NNATYHNN
NNDRATNN		 PBM
Weirauch et al.(2014)
pTH5124 		0.541 0.395
TTHERM_00243900
M01666_2.00 		Tetrahymena thermophila
NDDATYANN
NNTRATHHN		 PBM
Weirauch et al.(2014)
pTH5128 		0.508 0.372
For this family, TFs with SR scores > 0.422 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
TC008720-PA ARID/BRIGHT 40 126

Links

Other ARID/BRIGHT family TFs
Other Tribolium castaneum TFs

378 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SVE_0118900 Strongyloides venezuelensis SVE_0118900 I 0.000
BGLB006871 Biomphalaria glabrata BGLB006871 I 0.000
AFUN001443 Anopheles funestus AFUN001443 I 0.000
LDEC004906 Leptinotarsa decemlineata LDEC004906 I 0.000
Ocbimv22005044m.g Octopus bimaculoides Ocbimv22005044m.g I 0.000
TC006814 Tribolium castaneum TC006814 I 0.000
NV16554 Nasonia vitripennis NV16554 I 0.000
LotgiG79422 Lottia gigantea LotgiG79422 I 0.000
SPAL_0001132900 Strongyloides papillosus SPAL_0001132900 I 0.000
SSTP_0000472400 Strongyloides stercoralis SSTP_0000472400 I 0.000
CapteG178526 Capitella teleta CapteG178526 I 0.000
PTRK_0001642900 Parastrongyloides trichosuri PTRK_0001642900 N 0.000
EEL_0000136901 Elaeophora elaphi EEL_0000136901 N 0.000
nRc.2.0.1.g44757 Romanomermis culicivorax nRc.2.0.1.g44757 N 0.000
nOo.2.0.1.g03644 Onchocerca ochengi nOo.2.0.1.g03644 N 0.000
nLs.2.1.2.g02189 Litomosoides sigmodontis nLs.2.1.2.g02189 N 0.000
nDi.2.2.2.g00486 Dirofilaria immitis nDi.2.2.2.g00486 N 0.000
nAv.1.0.1.g03257 Acanthocheilonema viteae nAv.1.0.1.g03257 N 0.000
L898_g22792 Steinernema monticolum L898_g22792 N 0.000
L893_g25726 Steinernema glaseri L893_g25726 N 0.000
L892_g23905 Steinernema scapterisci L892_g23905 N 0.000
L889_g29315 Steinernema feltiae L889_g29315 N 0.000
L596_g21776 Steinernema carpocapsae L596_g21776 N 0.000
GPUH_0001488401 Gongylonema pulchrum GPUH_0001488401 N 0.000
GPLIN_000544200 Globodera pallida GPLIN_000544200 N 0.000
GPLIN_000092900 Globodera pallida GPLIN_000092900 N 0.000
WUBG_03870 Wuchereria bancrofti WUBG_03870 N 0.000
DME_0000120101 Dracunculus medinensis DME_0000120101 N 0.000
D917_04029 Trichinella nativa D917_04029 N 0.000
BXY_1725100 Bursaphelenchus xylophilus BXY_1725100 N 0.000
ASU_11495 Ascaris suum ASU_11495 N 0.000
ALUE_0001723901 Ascaris lumbricoides ALUE_0001723901 N 0.000
WBGene00247331 Onchocerca volvulus WBGene00247331 N 0.000
HelroG173259 Helobdella robusta HelroG173259 N 0.000
EFV52379 Trichinella spiralis EFV52379 N 0.000
Bm5997 Brugia malayi Bm5997 N 0.000