CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Carubv10022067m.g
(
Capsella rubella
)
ARID/BRIGHT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01388 (ARID)
IPR001606
Carubv10022067m.g
T016075_2.00
JGI:Phytozome (2018-Apr-12)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Carubv10022067m
ARID/BRIGHT
1
65
IPIVGGDKLDLHRLFYEVTSRGGLEMVIKDRRCKEVMDAFQFKKTVSNAASVLRKHYLKMLFEFE
Links
Other
ARID/BRIGHT
family TFs
Other
Capsella rubella
TFs
4 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
orange1.1g029808m.g
Citrus sinensis
orange1.1g029808m.g
I
0.451
ENSPMAG00000003030
Petromyzon marinus
ENSPMAG00000003030
N
0.440
Bostr.6758s0010
Boechera stricta
Bostr.6758s0010
N
0.494
Carubv10021996m.g
Capsella rubella
Carubv10021996m.g
N
0.689