orange1.1g012780m.g (Citrus sinensis)
ARID/BRIGHT

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF01388 (ARID) IPR001606 orange1.1g012780m.g T016159_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ARID3
M06695_2.00 		Arabidopsis thaliana
AAWWHNAAATYAAWW
WWTTRATTTNDWWTT		 Dap-seq
OMalley et al.(2016)
AT2G17410_col_a 		0.681 0.812
ARID6
M06694_2.00 		Arabidopsis thaliana
HAATTRAWTTN
NAAWTYAATTD		 Dap-seq
OMalley et al.(2016)
AT1G20910_col_a 		0.672 0.800
For this family, TFs with SR scores > 0.422 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
orange1.1g012780m ARID/BRIGHT 149 234
orange1.1g012818m ARID/BRIGHT 149 234
orange1.1g013477m ARID/BRIGHT 149 234
orange1.1g019019m ARID/BRIGHT 149 234

Links

Other ARID/BRIGHT family TFs
Other Citrus sinensis TFs

154 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
FOSL2 Homo sapiens ENSG00000075426 D 0.000
FOS Homo sapiens ENSG00000170345 D 0.000
FOSL1 Homo sapiens ENSG00000175592 D 0.000
Fos Mus musculus ENSMUSG00000021250 D 0.000
Fosl1 Mus musculus ENSMUSG00000024912 D 0.000
Fosl2 Mus musculus ENSMUSG00000029135 D 0.000
FOSL2 Anolis carolinensis ENSACAG00000009506 I 0.000
FOSL1 Anolis carolinensis ENSACAG00000010103 I 0.000
FOS Anolis carolinensis ENSACAG00000016921 I 0.000
ENSAMEG00000015695 Ailuropoda melanoleuca ENSAMEG00000015695 I 0.000
ENSAMEG00000017284 Ailuropoda melanoleuca ENSAMEG00000017284 I 0.000
ENSAMEG00000018335 Ailuropoda melanoleuca ENSAMEG00000018335 I 0.000
ENSAMXG00000013765 Astyanax mexicanus ENSAMXG00000013765 I 0.000
ENSAPLG00000011284 Anas platyrhynchos ENSAPLG00000011284 I 0.000
FOS Bos taurus ENSBTAG00000004322 I 0.000
FOSL1 Bos taurus ENSBTAG00000006194 I 0.000
FOSL2 Bos taurus ENSBTAG00000023929 I 0.000
FOSL2 Canis familiaris ENSCAFG00000005212 I 0.000
FOSL1 Canis familiaris ENSCAFG00000013132 I 0.000
FOS Canis familiaris ENSCAFG00000017040 I 0.000
FOSL1 Callithrix jacchus ENSCJAG00000001776 I 0.000
FOSL2 Callithrix jacchus ENSCJAG00000009019 I 0.000
FOS Callithrix jacchus ENSCJAG00000020633 I 0.000
ENSCPOG00000003247 Cavia porcellus ENSCPOG00000003247 I 0.000
ENSCPOG00000007491 Cavia porcellus ENSCPOG00000007491 I 0.000
ENSCPOG00000020774 Cavia porcellus ENSCPOG00000020774 I 0.000
ENSCSAG00000008055 Chlorocebus sabaeus ENSCSAG00000008055 I 0.000
ENSCSAG00000010278 Chlorocebus sabaeus ENSCSAG00000010278 I 0.000
ENSCSAG00000012136 Chlorocebus sabaeus ENSCSAG00000012136 I 0.000
fosab Danio rerio ENSDARG00000031683 I 0.000
FOSL1 Dasypus novemcinctus ENSDNOG00000003173 I 0.000
FOS Dasypus novemcinctus ENSDNOG00000031516 I 0.000
ENSDORG00000003738 Dipodomys ordii ENSDORG00000003738 I 0.000
Fosl1 Dipodomys ordii ENSDORG00000009958 I 0.000
FOS Equus caballus ENSECAG00000014260 I 0.000
FOSL2 Equus caballus ENSECAG00000017657 I 0.000
FOSL1 Equus caballus ENSECAG00000023092 I 0.000
FOSL2 Erinaceus europaeus ENSEEUG00000007937 I 0.000
FOS Erinaceus europaeus ENSEEUG00000013514 I 0.000
FOSL2 Echinops telfairi ENSETEG00000011721 I 0.000
ENSETEG00000017818 Echinops telfairi ENSETEG00000017818 I 0.000
ENSFALG00000006355 Ficedula albicollis ENSFALG00000006355 I 0.000
FOSL1 Felis catus ENSFCAG00000013275 I 0.000
FOS Felis catus ENSFCAG00000025370 I 0.000
FOSL2 Felis catus ENSFCAG00000029462 I 0.000
fosaa Gasterosteus aculeatus ENSGACG00000007617 I 0.000
FOS Gallus gallus ENSGALG00000028037 I 0.000
FOS Gorilla gorilla ENSGGOG00000000527 I 0.000
FOSL2 Gorilla gorilla ENSGGOG00000009435 I 0.000
FOSL1 Gorilla gorilla ENSGGOG00000011411 I 0.000
ENSLACG00000007288 Latimeria chalumnae ENSLACG00000007288 I 0.000
ENSLACG00000018157 Latimeria chalumnae ENSLACG00000018157 I 0.000
FOSL1 Loxodonta africana ENSLAFG00000001766 I 0.000
FOSL2 Loxodonta africana ENSLAFG00000009035 I 0.000
ENSLOCG00000010507 Lepisosteus oculatus ENSLOCG00000010507 I 0.000
ENSLOCG00000017169 Lepisosteus oculatus ENSLOCG00000017169 I 0.000
ENSMEUG00000010422 Macropus eugenii ENSMEUG00000010422 I 0.000
ENSMICG00000001423 Microcebus murinus ENSMICG00000001423 I 0.000
FOSL1 Microcebus murinus ENSMICG00000012846 I 0.000
FOS Microcebus murinus ENSMICG00000016026 I 0.000
FOSL2 Myotis lucifugus ENSMLUG00000000200 I 0.000
FOS Myotis lucifugus ENSMLUG00000003729 I 0.000
FOSL1 Myotis lucifugus ENSMLUG00000011050 I 0.000
FOSL1 Macaca mulatta ENSMMUG00000008653 I 0.000
ENSMMUG00000010574 Macaca mulatta ENSMMUG00000010574 I 0.000
FOSL2 Macaca mulatta ENSMMUG00000014464 I 0.000
FOS Monodelphis domestica ENSMODG00000005927 I 0.000
ENSMPUG00000009153 Mustela putorius furo ENSMPUG00000009153 I 0.000
ENSMPUG00000011433 Mustela putorius furo ENSMPUG00000011433 I 0.000
ENSMPUG00000017989 Mustela putorius furo ENSMPUG00000017989 I 0.000
ENSNLEG00000005945 Nomascus leucogenys ENSNLEG00000005945 I 0.000
ENSNLEG00000015308 Nomascus leucogenys ENSNLEG00000015308 I 0.000
ENSNLEG00000016463 Nomascus leucogenys ENSNLEG00000016463 I 0.000
FOS Ornithorhynchus anatinus ENSOANG00000005064 I 0.000
ENSOARG00000000072 Ovis aries ENSOARG00000000072 I 0.000
ENSOARG00000001783 Ovis aries ENSOARG00000001783 I 0.000
ENSOARG00000019483 Ovis aries ENSOARG00000019483 I 0.000
FOSL2 Oryctolagus cuniculus ENSOCUG00000010706 I 0.000
FOSL1 Oryctolagus cuniculus ENSOCUG00000011143 I 0.000
FOS Oryctolagus cuniculus ENSOCUG00000021506 I 0.000
FOSL2 Otolemur garnettii ENSOGAG00000007339 I 0.000
FOSL1 Otolemur garnettii ENSOGAG00000016518 I 0.000
FOS Otolemur garnettii ENSOGAG00000032356 I 0.000
ENSONIG00000020185 Oreochromis niloticus ENSONIG00000020185 I 0.000
FOSL1 Ochotona princeps ENSOPRG00000000605 I 0.000
FOSL2 Ochotona princeps ENSOPRG00000011952 I 0.000
FOS Ochotona princeps ENSOPRG00000012005 I 0.000
ENSPANG00000016424 Papio anubis ENSPANG00000016424 I 0.000
ENSPANG00000020551 Papio anubis ENSPANG00000020551 I 0.000
ENSPANG00000023125 Papio anubis ENSPANG00000023125 I 0.000
FOS Procavia capensis ENSPCAG00000001765 I 0.000
FOSL2 Procavia capensis ENSPCAG00000007502 I 0.000
FOSL1 Procavia capensis ENSPCAG00000011049 I 0.000
ENSPFOG00000015030 Poecilia formosa ENSPFOG00000015030 I 0.000
ENSPPYG00000003041 Pongo abelii ENSPPYG00000003041 I 0.000
ENSPPYG00000006002 Pongo abelii ENSPPYG00000006002 I 0.000
ENSPSIG00000003008 Pelodiscus sinensis ENSPSIG00000003008 I 0.000
ENSPSIG00000005821 Pelodiscus sinensis ENSPSIG00000005821 I 0.000
ENSPSIG00000017598 Pelodiscus sinensis ENSPSIG00000017598 I 0.000
FOSL1 Pan troglodytes ENSPTRG00000003901 I 0.000
FOS Pan troglodytes ENSPTRG00000006553 I 0.000
FOS Pteropus vampyrus ENSPVAG00000000671 I 0.000
FOSL1 Pteropus vampyrus ENSPVAG00000016964 I 0.000
Fos Rattus norvegicus ENSRNOG00000008015 I 0.000
Fosl1 Rattus norvegicus ENSRNOG00000020552 I 0.000
Fosl2 Rattus norvegicus ENSRNOG00000052357 I 0.000
ENSSHAG00000002406 Sarcophilus harrisii ENSSHAG00000002406 I 0.000
ENSSHAG00000017780 Sarcophilus harrisii ENSSHAG00000017780 I 0.000
FOS Sus scrofa ENSSSCG00000002383 I 0.000
FOSL1 Sus scrofa ENSSSCG00000012967 I 0.000
ENSSSCG00000027396 Sus scrofa ENSSSCG00000027396 I 0.000
ENSSTOG00000003005 Ictidomys tridecemlineatus ENSSTOG00000003005 I 0.000
ENSSTOG00000003296 Ictidomys tridecemlineatus ENSSTOG00000003296 I 0.000
ENSSTOG00000022839 Ictidomys tridecemlineatus ENSSTOG00000022839 I 0.000
FOSL2 Tupaia belangeri ENSTBEG00000002195 I 0.000
ENSTBEG00000007122 Tupaia belangeri ENSTBEG00000007122 I 0.000
FOS Taeniopygia guttata ENSTGUG00000012217 I 0.000
fosaa Tetraodon nigroviridis ENSTNIG00000017405 I 0.000
fosaa Takifugu rubripes ENSTRUG00000018314 I 0.000
ENSTSYG00000004446 Tarsius syrichta ENSTSYG00000004446 I 0.000
ENSTSYG00000008393 Tarsius syrichta ENSTSYG00000008393 I 0.000
ENSTSYG00000013658 Tarsius syrichta ENSTSYG00000013658 I 0.000
FOS Tursiops truncatus ENSTTRG00000007779 I 0.000
FOSL2 Tursiops truncatus ENSTTRG00000012544 I 0.000
FOSL1 Tursiops truncatus ENSTTRG00000016937 I 0.000
FOS Vicugna pacos ENSVPAG00000003894 I 0.000
ENSXMAG00000014809 Xiphophorus maculatus ENSXMAG00000014809 I 0.000
ISCW023105 Ixodes scapularis ISCW023105 I 0.000
NEMVEDRAFT_v1g232694 Nematostella vectensis NEMVEDRAFT_v1g232694 I 0.000
Alligator_sinensis_CCG009651.1 Alligator sinensis Alligator_sinensis_CCG009651.1 I 0.000
Cmyd_10002048 Chelonia mydas Cmyd_10002048 I 0.000
Cmyd_10013210 Chelonia mydas Cmyd_10013210 I 0.000
Cmyd_10014529 Chelonia mydas Cmyd_10014529 I 0.000
ENSBTAP00000005660-D1 Bos grunniens ENSBTAP00000005660-D1 I 0.000
ENSBTAP00000032838-D1 Bos grunniens ENSBTAP00000032838-D1 I 0.000
ENSP00000264716 Macaca fascicularis ENSP00000264716 I 0.000
ENSP00000306245 Macaca fascicularis ENSP00000306245 I 0.000
ENSP00000310170-D1 Bos grunniens ENSP00000310170-D1 I 0.000
ENSP00000310170 Macaca fascicularis ENSP00000310170 I 0.000
Myotis_brandtii_FOS_10012946 Myotis brandtii Myotis_brandtii_FOS_10012946 I 0.000
Myotis_brandtii_FOSL1_10030743 Myotis brandtii Myotis_brandtii_FOSL1_10030743 I 0.000
Myotis_brandtii_FOSL2_10031162 Myotis brandtii Myotis_brandtii_FOSL2_10031162 I 0.000
Ogr08028 Ophisaurus gracilis Ogr08028 I 0.000
Ogr13525 Ophisaurus gracilis Ogr13525 I 0.000
Pvit_01215 Pogona vitticeps Pvit_01215 I 0.000
Pvit_05292 Pogona vitticeps Pvit_05292 I 0.000
Pvit_16646 Pogona vitticeps Pvit_16646 I 0.000
estExt_gwp.C_680102 Branchiostoma floridae estExt_gwp.C_680102 I 0.000
fosl2.L Xenopus laevis XB-GENE-6252038 I 0.000
fosl1 Xenopus tropicalis XB-GENE-6257957 I 0.000
fosl2 Xenopus tropicalis XB-GENE-6258093 I 0.000
fos Xenopus tropicalis XB-GENE-866811 I 0.000
fos.S Xenopus laevis XB-GENE-866822 I 0.000