CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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AB01205.1
(
Alternaria brassicicola
)
ARID/BRIGHT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01388 (ARID)
IPR001606
AB01205.1
T016268_2.00
Superfamily (2010-Oct-26)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
NCU01238
M01669_2.00
Neurospora crassa
NYATNNNN
NNNNATRN
PBM
Weirauch et al.(2014)
pTH8942
0.653
0.816
For this family, TFs with SR scores >
0.422
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
AB01205.1
ARID/BRIGHT
183
270
ANLNYLDQLAKFHKQHGHSLTRFPSVDKRPLDLYKLKKAVEKRGGFERVCKQKKWAEIGRDLGYSGKIMSSLSTSLKNSYQKWLHPYE
Links
Other
ARID/BRIGHT
family TFs
Other
Alternaria brassicicola
TFs
213 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
PICST_78645
Scheffersomyces stipitis
PICST_78645
I
0.000
CPAG_03150
Candida parapsilosis
CPAG_03150
N
0.000
PGUG_05232
Candida guilliermondii
PGUG_05232
N
0.000
CaO19.12059
Candida albicans
CaO19.12059
N
0.000
CaO19.4590
Candida albicans
CaO19.4590
N
0.000
CD36_41920
Candida dubliniensis
CD36_41920
N
0.000
CORT_0E01340
Candida orthopsilosis
CORT_0E01340
N
0.000
CTRG_00244
Candida tropicalis
CTRG_00244
N
0.000
DEHA2D17930g
Debaryomyces hansenii
DEHA2D17930g
N
0.000
G210_1070
Candida maltosa
G210_1070
N
0.000
GNLVRS01_PISO0M04676g
Millerozyma farinosa
GNLVRS01_PISO0M04676g
N
0.000
GNLVRS01_PISO0N04809g
Millerozyma farinosa
GNLVRS01_PISO0N04809g
N
0.000
LELG_04351
Lodderomyces elongisporus
LELG_04351
N
0.000
PGUG_05232
Meyerozyma guilliermondii
PGUG_05232
N
0.000
SPAPADRAFT_155956
Spathaspora passalidarum
SPAPADRAFT_155956
N
0.000
e_gww1.1.1.1440.1
Pichia stipitis
e_gww1.1.1.1440.1
N
0.000