CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ADIR003833
(
Anopheles dirus
)
ARID/BRIGHT
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
PF01388 (ARID)
IPR001606
ADIR003833
T016377_2.00
Vectorbase (2015-Oct-22)
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
retn
M01664_2.00
Drosophila melanogaster
NDATHRNN
NNYDATHN
PBM
Weirauch et al.(2014)
pTH5119
0.670
0.847
retn
M03590_2.00
Drosophila melanogaster
NNATTRATHN
NDATYAATNN
SELEX
Nitta et al.(2015)
retn_1
0.670
0.847
retn
M05899_2.00
Drosophila melanogaster
AATYAAAM
KTTTRATT
B1H
Zhu et al.(2011)
retn_SANGER_5_FBgn0004795
0.670
0.847
retn
M09768_2.00
Drosophila melanogaster
NNRATTAADN
NHTTAATYNN
Transfac
Matys et al.(2006)
I$DRI_01
0.670
0.847
ACYPI009013
M01655_2.00
Acyrthosiphon pisum
NDATHAADN
NHTTDATHN
PBM
Weirauch et al.(2014)
pTH5117
0.670
0.681
cfi-1
M01667_2.00
Caenorhabditis elegans
NNATHDNN
NNHDATNN
PBM
Weirauch et al.(2014)
pTH5118
0.605
0.653
ARID3A
M01658_2.00
Microcebus murinus
NDATHAWDN
NHWTDATHN
PBM
Weirauch et al.(2014)
pTH9214
0.591
0.653
Arid3a
M00115_2.00
Mus musculus
NDATHADDN
NHHTDATHN
PBM
Badis et al.(2009)
Arid3a_3875
0.591
0.653
Arid3a
M01660_2.00
Mus musculus
NDATHAADN
NHTTDATHN
PBM
Weirauch et al.(2014)
pTH5169
0.591
0.653
ARID3A
M01662_2.00
Procavia capensis
NNATHDNNN
NNNHDATNN
PBM
Weirauch et al.(2014)
pTH9384
0.591
0.653
Arid3a
M02651_2.00
Mus musculus
ATYAAA
TTTRAT
SELEX
Mathelier et al.(2014)
MA0151.1
0.591
0.653
ARID3A
M09766_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DRI1_01
0.591
0.653
DDB_G0275333
M01656_2.00
Dictyostelium discoideum
NNATHDNNNN
NNNNHDATNN
PBM
Weirauch et al.(2014)
pTH5168
0.555
0.403
Arid3b
M01659_2.00
Mus musculus
NNDATTAAWWN
NWWTTAATHNN
PBM
Weirauch et al.(2014)
pTH4425
0.529
0.639
GSPATT00004674001
M01665_2.00
Paramecium tetraurelia
NNATYHNN
NNDRATNN
PBM
Weirauch et al.(2014)
pTH5124
0.503
0.347
TTHERM_00243900
M01666_2.00
Tetrahymena thermophila
NDDATYANN
NNTRATHHN
PBM
Weirauch et al.(2014)
pTH5128
0.471
0.347
For this family, TFs with SR scores >
0.422
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ADIR003833-PA
ARID/BRIGHT
14
109
MEAIAKSHARDRISERDRSLVVERGLLGEWGQPEGTPINRLPIMAKSVLDLYELYNLVIARGGLVDVINKKLWQEIIKGLHLPSSITSAAFTLRTQ
Links
Other
ARID/BRIGHT
family TFs
Other
Anopheles dirus
TFs
360 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SRM1
Arabidopsis thaliana
AT5G08520
D
0.000
Ciclev10032259m.g
Citrus clementina
Ciclev10032259m.g
I
0.000
Cla009230
Citrullus lanatus
Cla009230
I
0.000
Carubv10001525m.g
Capsella rubella
Carubv10001525m.g
I
0.000
Cagra.1365s0066
Capsella grandiflora
Cagra.1365s0066
I
0.000
Bostr.13129s0103
Boechera stricta
Bostr.13129s0103
I
0.000
Bostr.10199s0068
Boechera stricta
Bostr.10199s0068
I
0.000
Aquca_035_00057
Aquilegia coerulea
Aquca_035_00057
I
0.000
mgf009460m
Mimulus guttatus
mgf009460m
I
0.000
Cucsa.280970
Cucumis sativus
Cucsa.280970
I
0.000
Cucsa.013870
Cucumis sativus
Cucsa.013870
I
0.000
cassava18614.valid.m1
Manihot esculenta
cassava18614.valid.m1
I
0.000
30131.m007263
Ricinus communis
30131.m007263
I
0.000
Pm017050
Prunus mume
Pm017050
I
0.000
Pm006046
Prunus mume
Pm006046
I
0.000
Cla020348
Citrullus lanatus
Cla020348
I
0.000
PK13672.1
Cannabis sativa
PK13672.1
I
0.000
Eucgr.G02591
Eucalyptus grandis
Eucgr.G02591
I
0.000
evm.TU.supercontig_138.5
Carica papaya
evm.TU.supercontig_138.5
I
0.000
gene23544-v1.0-hybrid
Fragaria vesca
gene23544-v1.0-hybrid
I
0.000
Gorai.005G212900
Gossypium raimondii
Gorai.005G212900
I
0.000
Gorai.006G063000
Gossypium raimondii
Gorai.006G063000
I
0.000
Gorai.008G147400
Gossypium raimondii
Gorai.008G147400
I
0.000
Gorai.012G135600
Gossypium raimondii
Gorai.012G135600
I
0.000
Gorai.013G067600
Gossypium raimondii
Gorai.013G067600
I
0.000
Lus10013447.g
Linum usitatissimum
Lus10013447.g
I
0.000
MDP0000289018
Malus domestica
MDP0000289018
I
0.000
orange1.1g022439m.g
Citrus sinensis
orange1.1g022439m.g
I
0.000
SapurV1A.0234s0050
Salix purpurea
SapurV1A.0234s0050
I
0.000
SapurV1A.0333s0040
Salix purpurea
SapurV1A.0333s0040
I
0.000
SapurV1A.0450s0110
Salix purpurea
SapurV1A.0450s0110
I
0.000
SapurV1A.1671s0040
Salix purpurea
SapurV1A.1671s0040
I
0.000
Thhalv10014203m.g
Eutrema salsugineum
Thhalv10014203m.g
I
0.000
PGSC0003DMG400025303
Solanum tuberosum
PGSC0003DMG400025303
I
0.000
GLYMA18G18140
Glycine max
GLYMA18G18140
I
0.000
GLYMA20G01450
Glycine max
GLYMA20G01450
I
0.000
GLYMA20G24600
Glycine max
GLYMA20G24600
I
0.000
GRMZM2G149958
Zea mays
GRMZM2G149958
I
0.000
GLYMA10G42450
Glycine max
GLYMA10G42450
I
0.000
GSMUA_Achr1G17730_001
Musa acuminata
GSMUA_Achr1G17730_001
I
0.000
GSMUA_Achr9G20620_001
Musa acuminata
GSMUA_Achr9G20620_001
I
0.000
Ca_19000
Cicer arietinum
Ca_19000
I
0.000
GSMUA_Achr9G23760_001
Musa acuminata
GSMUA_Achr9G23760_001
I
0.000
MTR_1g111830
Medicago truncatula
MTR_1g111830
I
0.000
GLYMA08G40020
Glycine max
GLYMA08G40020
I
0.000
GLYMA07G28310
Glycine max
GLYMA07G28310
I
0.000
PRUPE_ppa009396mg
Prunus persica
PRUPE_ppa009396mg
I
0.000
PRUPE_ppa010926mg
Prunus persica
PRUPE_ppa010926mg
I
0.000
fgenesh2_kg.6__825__AT5G08520.1
Arabidopsis lyrata
fgenesh2_kg.6__825__AT5G08520.1
I
0.000
Bo9g174380
Brassica oleracea
Bo9g174380
I
0.000
Bo3g004970
Brassica oleracea
Bo3g004970
I
0.000
Bo2g009130
Brassica oleracea
Bo2g009130
I
0.000
TCM_007672
Theobroma cacao
TCM_007672
I
0.000
TCM_041160
Theobroma cacao
TCM_041160
I
0.000
VIT_10s0071g00660
Vitis vinifera
VIT_10s0071g00660
I
0.000
Ca_05454
Cicer arietinum
Ca_05454
I
0.000
Eucgr.J00349
Eucalyptus grandis
Eucgr.J00349
N
0.000
Pavir.Ga00233
Panicum virgatum
Pavir.Ga00233
N
0.000
Pavir.Gb00055
Panicum virgatum
Pavir.Gb00055
N
0.000
BRADI5G26110
Brachypodium distachyon
BRADI5G26110
N
0.000
Lus10041001.g
Linum usitatissimum
Lus10041001.g
N
0.000
AMTR_s00106p00065610
Amborella trichopoda
AMTR_s00106p00065610
N
0.000
GSMUA_Achr10G06880_001
Musa acuminata
GSMUA_Achr10G06880_001
N
0.000
gene00786-v1.0-hybrid
Fragaria vesca
gene00786-v1.0-hybrid
N
0.000
MTR_8g063600
Medicago truncatula
MTR_8g063600
N
0.000
OB04G36550
Oryza brachyantha
OB04G36550
N
0.000
ONIVA04G28100
Oryza nivara
ONIVA04G28100
N
0.000
gw1.13.182.1
Physcomitrella patens
gw1.13.182.1
N
0.000
e_gw1.256.18.1
Physcomitrella patens
e_gw1.256.18.1
N
0.000
Sb06g032880
Sorghum bicolor
Sb06g032880
N
0.000
Si022762m.g
Setaria italica
Si022762m.g
N
0.000
cassava42566.valid.m1
Manihot esculenta
cassava42566.valid.m1
N
0.000
Solyc04g008870.2
Solanum lycopersicum
Solyc04g008870.2
N
0.000
Ca_14522
Cicer arietinum
Ca_14522
N
0.000