Bra014192 (Brassica rapa)
B3

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02362 (B3) IPR003340 Bra014192 T018826_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
REM19
M06702_2.00 		Arabidopsis thaliana
TKWTTTTTTTTTKKY
RMMAAAAAAAAAWMA		 Dap-seq
OMalley et al.(2016)
REM19_col_a 		0.894 0.894
REM19
M06703_2.00 		Arabidopsis thaliana
NWBTTTTTTTTTTTTKKHHWH
DWDDMMAAAAAAAAAAAAVWN		 Dap-seq
OMalley et al.(2016)
REM19_colamp_a 		0.894 0.894
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bra014192.1-P B3 128 213

Links

Other B3 family TFs
Other Brassica rapa TFs

12 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
CPAG_02311 Candida parapsilosis CPAG_02311 N
PGUG_01805 Candida guilliermondii PGUG_01805 N
CANTEDRAFT_113303 Candida tenuis CANTEDRAFT_113303 N
CaO19.217 Candida albicans CaO19.217 N
CaO19.7849 Candida albicans CaO19.7849 N
CD36_23070 Candida dubliniensis CD36_23070 N
CORT_0C02650 Candida orthopsilosis CORT_0C02650 N
CTRG_01953 Candida tropicalis CTRG_01953 N
G210_5934 Candida maltosa G210_5934 N
PGUG_01805 Meyerozyma guilliermondii PGUG_01805 N
PICST_67626 Scheffersomyces stipitis PICST_67626 N
estExt_fgenesh1_pg.C_chr_4.10468 Pichia stipitis estExt_fgenesh1_pg.C_chr_4.10468 N