Thhalv10006075m.g (Eutrema salsugineum)
BBR

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF06217 (GAGA_bind) IPR010409 Thhalv10006075m.g T024902_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
BPC6
M06719_2.00 		Arabidopsis thaliana
KAGAGAGAGAGAGAGAGAGAG
CTCTCTCTCTCTCTCTCTCTM		 Dap-seq
OMalley et al.(2016)
BPC6_col_a 		0.945 0.945
For this family, TFs with SR scores > 0.700 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Thhalv10006075m BBR 1 346

Links

Other BBR family TFs
Other Eutrema salsugineum TFs

41 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
TRIUR3_31540 Triticum urartu TRIUR3_31540 N
TTRE_0000731701 Trichuris trichiura TTRE_0000731701 N
L892_g29473 Steinernema scapterisci L892_g29473 N
LCUP016690 Lucilia cuprina LCUP016690 N
LCUP013620 Lucilia cuprina LCUP013620 N
LCUP013573 Lucilia cuprina LCUP013573 N
LCUP013541 Lucilia cuprina LCUP013541 N
LCUP013373 Lucilia cuprina LCUP013373 N
LCUP009513 Lucilia cuprina LCUP009513 N
LCUP009465 Lucilia cuprina LCUP009465 N
LCUP003280 Lucilia cuprina LCUP003280 N
ACYPI085083 Acyrthosiphon pisum ACYPI085083 N
TRIUR3_30002 Triticum urartu TRIUR3_30002 N
Traes_2DS_1FBA5F748 Triticum aestivum Traes_2DS_1FBA5F748 N
Traes_2BS_E2EDA1CE91 Triticum aestivum Traes_2BS_E2EDA1CE91 N
MLOC_73670 Hordeum vulgare MLOC_73670 N
MLOC_32526 Hordeum vulgare MLOC_32526 N
MLOC_17065 Hordeum vulgare MLOC_17065 N
F775_07927 Aegilops tauschii F775_07927 N
BOTBODRAFT_29480 Botryobasidium botryosum BOTBODRAFT_29480 N
BOTBODRAFT_170285 Botryobasidium botryosum BOTBODRAFT_170285 N