OB01G17890 (Oryza brachyantha)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02892 (zf-BED) IPR003656 OB01G17890 T027042_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
OB01G17890.1 BED ZF 5 50

Links

Other BED ZF family TFs
Other Oryza brachyantha TFs

16 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
BGIOSGA002103 Oryza indica BGIOSGA002103 N 0.949
BRADI2G07297 Brachypodium distachyon BRADI2G07297 N 0.795
GSMUA_Achr8G19830_001 Musa acuminata GSMUA_Achr8G19830_001 N 0.800
MLOC_67613 Hordeum vulgare MLOC_67613 N 0.795
ORGLA01G0068100 Oryza glaberrima ORGLA01G0068100 N 0.949
OS01G0222700 Oryza sativa OS01G0222700 N 0.949
PGSC0003DMG400009096 Solanum tuberosum PGSC0003DMG400009096 N 0.821
Sb03g001335 Sorghum bicolor Sb03g001335 N 0.875
Solyc03g007510.2 Solanum lycopersicum Solyc03g007510.2 N 0.795
Traes_3DS_5523A155D Triticum aestivum Traes_3DS_5523A155D N 0.795
TRIUR3_07707 Triticum urartu TRIUR3_07707 N 0.795
evm.TU.supercontig_3.39 Carica papaya evm.TU.supercontig_3.39 N 0.795
MDP0000411586 Malus domestica MDP0000411586 N 0.700
MDP0000520527 Malus domestica MDP0000520527 N 0.700
Pavir.Ea00125 Panicum virgatum Pavir.Ea00125 N 0.897
Pavir.Eb00173 Panicum virgatum Pavir.Eb00173 N 0.875