ORGLA03G0300400 (Oryza glaberrima)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF02892 (zf-BED) IPR003656 ORGLA03G0300400 T027140_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
ORGLA03G0300400.1 BED ZF 69 128

Links

Other BED ZF family TFs
Other Oryza glaberrima TFs

61 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
Ciclev10007308m.g Citrus clementina Ciclev10007308m.g N 0.727
Sb08g005330 Sorghum bicolor Sb08g005330 N 0.705
Si000431m.g Setaria italica Si000431m.g N 0.818
Si034159m.g Setaria italica Si034159m.g N 0.795
Solyc10g080090.1 Solanum lycopersicum Solyc10g080090.1 N 0.705
Solyc12g009640.1 Solanum lycopersicum Solyc12g009640.1 N 0.727
TCM_038144 Theobroma cacao TCM_038144 N 0.705
Traes_4AL_54F25AA7C Triticum aestivum Traes_4AL_54F25AA7C N 0.864
Traes_4AL_A494372EB Triticum aestivum Traes_4AL_A494372EB N 0.750
Traes_4BS_5B1737D7C Triticum aestivum Traes_4BS_5B1737D7C N 0.750
Traes_4BS_D5227ED8B Triticum aestivum Traes_4BS_D5227ED8B N 0.864
Traes_4DS_990D31BB1 Triticum aestivum Traes_4DS_990D31BB1 N 0.864
Traes_4DS_9C5CECE46 Triticum aestivum Traes_4DS_9C5CECE46 N 0.750
VIT_11s0016g05750 Vitis vinifera VIT_11s0016g05750 N 0.727
mgf025287m Mimulus guttatus mgf025287m N 0.727
Bostr.0556s0643 Boechera stricta Bostr.0556s0643 N 0.721
Sb02g043380 Sorghum bicolor Sb02g043380 N 0.886
Eucgr.C01383 Eucalyptus grandis Eucgr.C01383 N 0.727
gene30791-v1.0-hybrid Fragaria vesca gene30791-v1.0-hybrid N 0.727
gene31107-v1.0-hybrid Fragaria vesca gene31107-v1.0-hybrid N 0.727
Lus10032337.g Linum usitatissimum Lus10032337.g N 0.795
MDP0000394762 Malus domestica MDP0000394762 N 0.727
orange1.1g002915m.g Citrus sinensis orange1.1g002915m.g N 0.727
Pavir.Ea02468 Panicum virgatum Pavir.Ea02468 N 0.795
Pavir.Eb00995 Panicum virgatum Pavir.Eb00995 N 0.818
Pavir.Eb00997 Panicum virgatum Pavir.Eb00997 N 0.818
Pavir.Ia00683 Panicum virgatum Pavir.Ia00683 N 0.795
Pavir.J05554 Panicum virgatum Pavir.J05554 N 0.795
Pavir.J31170 Panicum virgatum Pavir.J31170 N 0.841
SapurV1A.0197s0170 Salix purpurea SapurV1A.0197s0170 N 0.705
PK27100.1 Cannabis sativa PK27100.1 N 0.727
GSMUA_Achr8G29120_001 Musa acuminata GSMUA_Achr8G29120_001 N 0.818
BGIOSGA009862 Oryza indica BGIOSGA009862 N 1.000
BGIOSGA018468 Oryza indica BGIOSGA018468 N 1.000
BGIOSGA020445 Oryza indica BGIOSGA020445 N 1.000
BRADI1G09650 Brachypodium distachyon BRADI1G09650 N 0.705
BRADI1G09660 Brachypodium distachyon BRADI1G09660 N 0.977
BRADI3G16050 Brachypodium distachyon BRADI3G16050 N 0.786
BRADI3G40810 Brachypodium distachyon BRADI3G40810 N 0.750
GLYMA13G22855 Glycine max GLYMA13G22855 N 0.727
GLYMA13G22881 Glycine max GLYMA13G22881 N 0.727
GLYMA16G32921 Glycine max GLYMA16G32921 N 0.705
GLYMA17G11981 Glycine max GLYMA17G11981 N 0.705
GSMUA_Achr10G16260_001 Musa acuminata GSMUA_Achr10G16260_001 N 0.841
GSMUA_Achr3G02770_001 Musa acuminata GSMUA_Achr3G02770_001 N 0.795
GSMUA_Achr3G16690_001 Musa acuminata GSMUA_Achr3G16690_001 N 0.818
HAT Arabidopsis thaliana AT3G42170 N 0.721
MLOC_66012 Hordeum vulgare MLOC_66012 N 0.750
MLOC_75540 Hordeum vulgare MLOC_75540 N 0.864
OB03G40190 Oryza brachyantha OB03G40190 N 0.977
OB08G27840 Oryza brachyantha OB08G27840 N 0.818
OB08G27850 Oryza brachyantha OB08G27850 N 0.818
ORGLA05G0072400 Oryza glaberrima ORGLA05G0072400 N 1.000
ORGLA05G0236800 Oryza glaberrima ORGLA05G0236800 N 1.000
ORGLA05G0237000 Oryza glaberrima ORGLA05G0237000 N 0.727
OS03G0733400 Oryza sativa OS03G0733400 N 1.000
OS05G0583200 Oryza sativa OS05G0583200 N 0.727
PGSC0003DMG400002911 Solanum tuberosum PGSC0003DMG400002911 N 0.705
PGSC0003DMG400023690 Solanum tuberosum PGSC0003DMG400023690 N 0.705
PRUPE_ppa001983mg Prunus persica PRUPE_ppa001983mg N 0.705
Sb01g009090 Sorghum bicolor Sb01g009090 N 0.818