CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Sb06g029390
(
Sorghum bicolor
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
IPR003656
Sb06g029390
T027608_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Sb06g029390.1
BED ZF
43
89
SKVWEEYKPVFLNGKVQFAECLYCHSRMSCKDSNGTSHLWRHQKICP
Sb06g029390.1
BED ZF
142
192
SKVWREFSPIYVEGKLQAADCVHCRKRLSANKFGGRSHLSRHLLTCQARRG
Links
Other
BED ZF
family TFs
Other
Sorghum bicolor
TFs
13 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
30178.m000863
Ricinus communis
30178.m000863
N
PK01836.1
Cannabis sativa
PK01836.1
N
SapurV1A.0071s0660
Salix purpurea
SapurV1A.0071s0660
N
orange1.1g030575m.g
Citrus sinensis
orange1.1g030575m.g
N
Gorai.001G227800
Gossypium raimondii
Gorai.001G227800
N
evm.TU.supercontig_8.54
Carica papaya
evm.TU.supercontig_8.54
N
Eucgr.H00706
Eucalyptus grandis
Eucgr.H00706
N
Ciclev10016721m.g
Citrus clementina
Ciclev10016721m.g
N
Bostr.2021s0020
Boechera stricta
Bostr.2021s0020
N
mgf019147m
Mimulus guttatus
mgf019147m
N
AT4G12850
Arabidopsis thaliana
AT4G12850
N
Ca_17053
Cicer arietinum
Ca_17053
N
TCM_002653
Theobroma cacao
TCM_002653
N
PRUPE_ppa019053mg
Prunus persica
PRUPE_ppa019053mg
N
POPTR_0014s17510
Populus trichocarpa
POPTR_0014s17510
N
POPTR_0002s24040
Populus trichocarpa
POPTR_0002s24040
N
GLYMA18G24443
Glycine max
GLYMA18G24443
N
GLYMA08G45680
Glycine max
GLYMA08G45680
N
fgenesh2_kg.9__81__AT4G12850.1
Arabidopsis lyrata
fgenesh2_kg.9__81__AT4G12850.1
N