CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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Solyc10g007810.2
(
Solanum lycopersicum
)
BED ZF
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF02892 (zf-BED)
IPR003656
Solyc10g007810.2
T027712_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
Solyc10g007810.2.1
BED ZF
17
68
SVVWNDFDRVKKGDTFVAICRHCKRKLSGSSTSGTSHLRNHLIRCRRRSNHD
Links
Other
BED ZF
family TFs
Other
Solanum lycopersicum
TFs
22 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
LEMA_P114390.1
Leptosphaeria maculans
LEMA_P114390.1
I
Moror_6135
Moniliophthora roreri
Moror_6135
I
SAKL0F03872g
Lachancea kluyveri
SAKL0F03872g
I
ACRE_020880
Acremonium chrysogenum
ACRE_020880
N
BN946_scf184844.g19
Trametes cinnabarina
BN946_scf184844.g19
N
GLOINDRAFT_26890
Rhizophagus irregularis
GLOINDRAFT_26890
N
GLOTRDRAFT_127199
Gloeophyllum trabeum
GLOTRDRAFT_127199
N
M408DRAFT_22846
Serendipita vermifera
M408DRAFT_22846
N
MVLG_00343
Microbotryum violaceum
MVLG_00343
N
MVLG_04343
Microbotryum violaceum
MVLG_04343
N
PTRG_07337
Pyrenophora triticirepentis
PTRG_07337
N