Cagra.10840s0006 (Capsella grandiflora)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02892 (zf-BED) IPR003656 Cagra.10840s0006 T028207_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Cagra.10840s0006.1.p BED ZF 21 68

Links

Other BED ZF family TFs
Other Capsella grandiflora TFs

22 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ZNF618 Tupaia belangeri ENSTBEG00000000415 N
ZNF618 Otolemur garnettii ENSOGAG00000014816 N
ENSONIG00000015003 Oreochromis niloticus ENSONIG00000015003 N
ZNF618 Ochotona princeps ENSOPRG00000005497 N
ZNF618 Procavia capensis ENSPCAG00000000187 N
ENSPPYG00000019526 Pongo abelii ENSPPYG00000019526 N
ENSPSIG00000016588 Pelodiscus sinensis ENSPSIG00000016588 N
ZNF618 Pteropus vampyrus ENSPVAG00000011944 N
Zfp618 Rattus norvegicus ENSRNOG00000006719 N
ENSSHAG00000015909 Sarcophilus harrisii ENSSHAG00000015909 N
ZNF618 Sus scrofa ENSSSCG00000005484 N
ENSSTOG00000022322 Ictidomys tridecemlineatus ENSSTOG00000022322 N
ZNF618 Oryctolagus cuniculus ENSOCUG00000002794 N
ZNF618 Taeniopygia guttata ENSTGUG00000002591 N
znf618 Tetraodon nigroviridis ENSTNIG00000018743 N
ZNF618 Tursiops truncatus ENSTTRG00000005353 N
Aan_R008050 Calypte anna Aan_R008050 N
Afo_R011854 Aptenodytes forsteri Afo_R011854 N
Alligator_sinensis_CCG016138.1 Alligator sinensis Alligator_sinensis_CCG016138.1 N
ENSP00000363241-D1 Bos grunniens ENSP00000363241-D1 N
ENSP00000363241 Macaca fascicularis ENSP00000363241 N
Gfo_R015405 Geospiza fortis Gfo_R015405 N
Myotis_brandtii_ZNF618_10028443 Myotis brandtii Myotis_brandtii_ZNF618_10028443 N
ENSLACG00000009597 Latimeria chalumnae ENSLACG00000009597 N
ENSAMXG00000009099 Astyanax mexicanus ENSAMXG00000009099 N
ZNF618 Bos taurus ENSBTAG00000025659 N
ZNF618 Canis familiaris ENSCAFG00000003282 N
ZNF618 Cavia porcellus ENSCPOG00000010468 N
ZNF618 Dasypus novemcinctus ENSDNOG00000012611 N
Zfp618 Dipodomys ordii ENSDORG00000014008 N
ZNF618 Equus caballus ENSECAG00000020621 N
ZNF618 Felis catus ENSFCAG00000013342 N
ZNF618 Homo sapiens ENSG00000157657 N
znf618 Gasterosteus aculeatus ENSGACG00000016617 N
ZNF618 Gorilla gorilla ENSGGOG00000014177 N
ENSAMEG00000012889 Ailuropoda melanoleuca ENSAMEG00000012889 N
ZNF618 Loxodonta africana ENSLAFG00000011286 N
ZNF618 Meleagris gallopavo ENSMGAG00000001586 N
ZNF618 Microcebus murinus ENSMICG00000015151 N
ZNF618 Macaca mulatta ENSMMUG00000008557 N
ZNF618 Monodelphis domestica ENSMODG00000004063 N
ENSMPUG00000008085 Mustela putorius furo ENSMPUG00000008085 N
Zfp618 Mus musculus ENSMUSG00000028358 N
ENSNLEG00000016765 Nomascus leucogenys ENSNLEG00000016765 N
ZNF618 Ornithorhynchus anatinus ENSOANG00000005539 N
ENSOARG00000006161 Ovis aries ENSOARG00000006161 N