Gorai.004G271300 (Gossypium raimondii)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02892 (zf-BED) IPR003656 Gorai.004G271300 T028334_2.00 JGI:Phytozome (2018-Apr-12)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
Gorai.004G271300.1 BED ZF 17 65
Gorai.004G271300.2 BED ZF 17 65

Links

Other BED ZF family TFs
Other Gossypium raimondii TFs

30 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
ANAC050 Arabidopsis thaliana AT3G10480 D
Carubv10013694m.g Capsella rubella Carubv10013694m.g I
Ciclev10031606m.g Citrus clementina Ciclev10031606m.g I
Carubv10013564m.g Capsella rubella Carubv10013564m.g I
Cagra.9217s0020 Capsella grandiflora Cagra.9217s0020 I
Cagra.0834s0029 Capsella grandiflora Cagra.0834s0029 I
Cagra.0834s0028 Capsella grandiflora Cagra.0834s0028 I
Bostr.22252s0012 Boechera stricta Bostr.22252s0012 I
Bostr.22252s0011 Boechera stricta Bostr.22252s0011 I
mgf004743m Mimulus guttatus mgf004743m I
mgf000623m Mimulus guttatus mgf000623m I
Cucsa.308760 Cucumis sativus Cucsa.308760 I
Pm017547 Prunus mume Pm017547 I
Cla020838 Citrullus lanatus Cla020838 I
Ca_08371 Cicer arietinum Ca_08371 I
VIT_13s0019g05240 Vitis vinifera VIT_13s0019g05240 I
VIT_13s0019g05230 Vitis vinifera VIT_13s0019g05230 I
TRIUR3_33524 Triticum urartu TRIUR3_33524 I
Traes_7DS_9FBF54244 Triticum aestivum Traes_7DS_9FBF54244 I
Traes_7BL_FB5FAC1E8 Triticum aestivum Traes_7BL_FB5FAC1E8 I
Traes_6AL_8BA1FF8B2 Triticum aestivum Traes_6AL_8BA1FF8B2 I
TCM_043357 Theobroma cacao TCM_043357 I
MDP0000437676 Malus domestica MDP0000437676 I
chr5.CM0909.750.nc Lotus japonicus chr5.CM0909.750.nc I
PK06477.1 Cannabis sativa PK06477.1 I
Thhalv10020745m.g Eutrema salsugineum Thhalv10020745m.g I
Thhalv10020717m.g Eutrema salsugineum Thhalv10020717m.g I
SapurV1A.0213s0310 Salix purpurea SapurV1A.0213s0310 I
Pavir.Fb02407 Panicum virgatum Pavir.Fb02407 I
Pavir.Fa00048 Panicum virgatum Pavir.Fa00048 I
Pavir.Ab03009 Panicum virgatum Pavir.Ab03009 I
Pavir.Aa00085 Panicum virgatum Pavir.Aa00085 I
orange1.1g014130m.g Citrus sinensis orange1.1g014130m.g I
Solyc05g055480.2 Solanum lycopersicum Solyc05g055480.2 I
MDP0000258167 Malus domestica MDP0000258167 I
Lus10038670.g Linum usitatissimum Lus10038670.g I
Lus10037939.g Linum usitatissimum Lus10037939.g I
Lus10023537.g Linum usitatissimum Lus10023537.g I
Gorai.012G007000 Gossypium raimondii Gorai.012G007000 I
Gorai.011G234200 Gossypium raimondii Gorai.011G234200 I
Gorai.009G309300 Gossypium raimondii Gorai.009G309300 I
gene23561-v1.0-hybrid Fragaria vesca gene23561-v1.0-hybrid I
Eucgr.J01038 Eucalyptus grandis Eucgr.J01038 I
Bra029844 Brassica rapa Bra029844 I
GRMZM2G113950 Zea mays GRMZM2G113950 I
GLYMA20G33430 Glycine max GLYMA20G33430 I
GLYMA10G34130 Glycine max GLYMA10G34130 I
ANAC052 Arabidopsis lyrata fgenesh2_kg.3__1083__AT3G10490.2 I
ANAC050 Arabidopsis lyrata fgenesh1_pm.C_scaffold_3000864 I
F775_27564 Aegilops tauschii F775_27564 I
BRADI3G56080 Brachypodium distachyon BRADI3G56080 I
BRADI3G12470 Brachypodium distachyon BRADI3G12470 I
Bra034119 Brassica rapa Bra034119 I
Bra034118 Brassica rapa Bra034118 I
Si016620m.g Setaria italica Si016620m.g I
Bra001366 Brassica rapa Bra001366 I
Bra001365 Brassica rapa Bra001365 I
Bo5g137360 Brassica oleracea Bo5g137360 I
Bo3g062710 Brassica oleracea Bo3g062710 I
Bo3g062700 Brassica oleracea Bo3g062700 I
Bo1g143850 Brassica oleracea Bo1g143850 I
Bo1g143840 Brassica oleracea Bo1g143840 I
BGIOSGA026481 Oryza indica BGIOSGA026481 I
ANAC052 Arabidopsis thaliana AT3G10490 I
OPUNC08G21700 Oryza punctata OPUNC08G21700 I
Solyc05g055470.2 Solanum lycopersicum Solyc05g055470.2 I
Si013361m.g Setaria italica Si013361m.g I
Sb07g023900 Sorghum bicolor Sb07g023900 I
Sb04g037720 Sorghum bicolor Sb04g037720 I
POPTR_0010s23630 Populus trichocarpa POPTR_0010s23630 I
PGSC0003DMG402023373 Solanum tuberosum PGSC0003DMG402023373 I
PGSC0003DMG401023373 Solanum tuberosum PGSC0003DMG401023373 I
OS08G0562200 Oryza sativa OS08G0562200 I
ORUFI08G26250 Oryza rufipogon ORUFI08G26250 I
ORGLA08G0191600 Oryza glaberrima ORGLA08G0191600 I
ONIVA08G26810 Oryza nivara ONIVA08G26810 I
OMERI08G18580 Oryza meridionalis OMERI08G18580 I
OLONG_023179 Oryza longistaminata OLONG_023179 I
OGLUM08G25240 Oryza glumaepatula OGLUM08G25240 I
OBART08G23760 Oryza barthii OBART08G23760 I
OB08G30590 Oryza brachyantha OB08G30590 I
MTR_1g090720 Medicago truncatula MTR_1g090720 I
LPERR08G20450 Leersia perrieri LPERR08G20450 I
GRMZM2G125777 Zea mays GRMZM2G125777 I
Eucgr.G02740 Eucalyptus grandis Eucgr.G02740 N