PDK_20s1489551g002 (Phoenix dactylifera)
BED ZF

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source
PF02892 (zf-BED) IPR003656 PDK_20s1489551g002 T029010_2.00 Superfamily (2010-Oct-26)

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No TFs with similar DNA binding domains

DNA Binding Domains

Protein ID Domain From To Sequence
PDK_20s1489551g002 BED ZF 43 85

Links

Other BED ZF family TFs
Other Phoenix dactylifera TFs

42 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
MDP0000155004 Malus domestica MDP0000155004 N 0.884
cassava37500.valid.m1 Manihot esculenta cassava37500.valid.m1 N 0.907
Cucsa.090680 Cucumis sativus Cucsa.090680 N 0.907
Aquca_002_01079 Aquilegia coerulea Aquca_002_01079 N 0.907
Bostr.7128s0463 Boechera stricta Bostr.7128s0463 N 0.814
Cagra.0909s0036 Capsella grandiflora Cagra.0909s0036 N 0.814
Carubv10008481m.g Capsella rubella Carubv10008481m.g N 0.814
Ciclev10019100m.g Citrus clementina Ciclev10019100m.g N 0.907
Eucgr.B00689 Eucalyptus grandis Eucgr.B00689 N 0.814
gene26197-v1.0-hybrid Fragaria vesca gene26197-v1.0-hybrid N 0.884
Gorai.007G008000 Gossypium raimondii Gorai.007G008000 N 0.884
cassava37499.valid.m1 Manihot esculenta cassava37499.valid.m1 N 0.907
MDP0000637083 Malus domestica MDP0000637083 N 0.907
orange1.1g008805m.g Citrus sinensis orange1.1g008805m.g N 0.907
Pavir.Ea00771 Panicum virgatum Pavir.Ea00771 N 0.721
Pavir.Eb00818 Panicum virgatum Pavir.Eb00818 N 0.721
SapurV1A.0851s0040 Salix purpurea SapurV1A.0851s0040 N 0.930
SapurV1A.3382s0020 Salix purpurea SapurV1A.3382s0020 N 0.930
Thhalv10006990m.g Eutrema salsugineum Thhalv10006990m.g N 0.814
PK14806.1 Cannabis sativa PK14806.1 N 0.930
LjSGA_062426.1 Lotus japonicus LjSGA_062426.1 N 0.860
PGSC0003DMG400005619 Solanum tuberosum PGSC0003DMG400005619 N 0.837
AT1G18560 Arabidopsis thaliana AT1G18560 N 0.814
BGIOSGA002631 Oryza indica BGIOSGA002631 N 0.744
Bo5g083750 Brassica oleracea Bo5g083750 N 0.721
Bo8g104310 Brassica oleracea Bo8g104310 N 0.721
GLYMA05G07875 Glycine max GLYMA05G07875 N 0.860
GLYMA17G13141 Glycine max GLYMA17G13141 N 0.860
GSMUA_Achr6G09360_001 Musa acuminata GSMUA_Achr6G09360_001 N 0.721
OB01G10840 Oryza brachyantha OB01G10840 N 0.744
ORGLA01G0007300 Oryza glaberrima ORGLA01G0007300 N 0.744
OS01G0111400 Oryza sativa OS01G0111400 N 0.744
AMTR_s00024p00250640 Amborella trichopoda AMTR_s00024p00250640 N 0.953
POPTR_0012s05580 Populus trichocarpa POPTR_0012s05580 N 0.930
PRUPE_ppa002398mg Prunus persica PRUPE_ppa002398mg N 0.907
Sb03g008300 Sorghum bicolor Sb03g008300 N 0.721
Si000514m.g Setaria italica Si000514m.g N 0.721
Solyc03g119830.2 Solanum lycopersicum Solyc03g119830.2 N 0.837
TCM_012243 Theobroma cacao TCM_012243 N 0.884
VIT_17s0000g04250 Vitis vinifera VIT_17s0000g04250 N 0.930
Pm030213 Prunus mume Pm030213 N 0.907
cassava37498.valid.m1 Manihot esculenta cassava37498.valid.m1 N 0.907