Bo1g024080 (Brassica oleracea)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 Bo1g024080 T031074_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
DYT1
M02654_2.00 		Arabidopsis thaliana
TCACGTGWYTBRYK
MRYVARWCACGTGA		 SELEX
Mathelier et al.(2014)
MA0580.1 		0.864 0.959
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
Bo1g024080.1 bHLH 33 81

Links

Other bHLH family TFs
Other Brassica oleracea TFs

9 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
AtMYB70 Arabidopsis thaliana AT2G23290 D
F3A4.140 Arabidopsis thaliana AT3G50060 D
MYB73 Arabidopsis thaliana AT4G37260 D
MYB44 Arabidopsis thaliana AT5G67300 D
OS02G0187700 Oryza sativa OS02G0187700 D
PK07741.1 Cannabis sativa PK07741.1 D
PK28565.1 Cannabis sativa PK28565.1 D
MYB25 Arabidopsis lyrata Al_scaffold_0004_2572 I
AMTR_s00006p00225600 Amborella trichopoda AMTR_s00006p00225600 I
AMTR_s00007p00169630 Amborella trichopoda AMTR_s00007p00169630 I
AMTR_s00029p00183640 Amborella trichopoda AMTR_s00029p00183640 I
MYB25 Arabidopsis thaliana AT2G39880 I
MYB109 Arabidopsis thaliana AT3G55730 I
BGIOSGA000485 Oryza indica BGIOSGA000485 I
BGIOSGA020819 Oryza indica BGIOSGA020819 I
BGIOSGA030245 Oryza indica BGIOSGA030245 I
Bo1g004900 Brassica oleracea Bo1g004900 I
Bo1g082480 Brassica oleracea Bo1g082480 I
Bo1g144680 Brassica oleracea Bo1g144680 I
Bo2g167960 Brassica oleracea Bo2g167960 I
Bo3g153550 Brassica oleracea Bo3g153550 I
Bo4g025810 Brassica oleracea Bo4g025810 I
Bo4g151410 Brassica oleracea Bo4g151410 I
Bo7g063830 Brassica oleracea Bo7g063830 I
Bo7g099180 Brassica oleracea Bo7g099180 I
Bo7g118450 Brassica oleracea Bo7g118450 I
Bo8g079430 Brassica oleracea Bo8g079430 I
Bo8g090160 Brassica oleracea Bo8g090160 I
Bra001323 Brassica rapa Bra001323 I
Bra005006 Brassica rapa Bra005006 I
Bra007186 Brassica rapa Bra007186 I
Bra010593 Brassica rapa Bra010593 I
Bra011749 Brassica rapa Bra011749 I
Bra012149 Brassica rapa Bra012149 I
Bra012910 Brassica rapa Bra012910 I
Bra017813 Brassica rapa Bra017813 I
Bra029990 Brassica rapa Bra029990 I
Bra032176 Brassica rapa Bra032176 I
Bra034057 Brassica rapa Bra034057 I
Bra036048 Brassica rapa Bra036048 I
BRADI3G06470 Brachypodium distachyon BRADI3G06470 I
BRADI4G08220 Brachypodium distachyon BRADI4G08220 I
AtMYB70 Arabidopsis lyrata fgenesh2_kg.4__260__AT2G23290.1 I
MYB77 Arabidopsis lyrata fgenesh2_kg.5__1356__AT3G50060.1 I
GLYMA04G03910 Glycine max GLYMA04G03910 I
GLYMA04G04490 Glycine max GLYMA04G04490 I
GLYMA05G21220 Glycine max GLYMA05G21220 I
GLYMA06G04010 Glycine max GLYMA06G04010 I
GLYMA11G05550 Glycine max GLYMA11G05550 I
GLYMA14G09540 Glycine max GLYMA14G09540 I
GLYMA17G35620 Glycine max GLYMA17G35620 I
GLYMA17G36370 Glycine max GLYMA17G36370 I
GRMZM2G050550 Zea mays GRMZM2G050550 I
GRMZM2G087955 Zea mays GRMZM2G087955 I
GRMZM2G145444 Zea mays GRMZM2G145444 I
GSMUA_Achr1G09750_001 Musa acuminata GSMUA_Achr1G09750_001 I
GSMUA_Achr1G26140_001 Musa acuminata GSMUA_Achr1G26140_001 I
GSMUA_Achr3G13070_001 Musa acuminata GSMUA_Achr3G13070_001 I
GSMUA_Achr3G28230_001 Musa acuminata GSMUA_Achr3G28230_001 I
GSMUA_Achr4G09450_001 Musa acuminata GSMUA_Achr4G09450_001 I
GSMUA_Achr4G12950_001 Musa acuminata GSMUA_Achr4G12950_001 I
GSMUA_Achr4G20150_001 Musa acuminata GSMUA_Achr4G20150_001 I
GSMUA_Achr5G28780_001 Musa acuminata GSMUA_Achr5G28780_001 I
GSMUA_Achr6G33470_001 Musa acuminata GSMUA_Achr6G33470_001 I
GSMUA_Achr8G25220_001 Musa acuminata GSMUA_Achr8G25220_001 I
GSMUA_Achr9G03720_001 Musa acuminata GSMUA_Achr9G03720_001 I
GSMUA_Achr9G22600_001 Musa acuminata GSMUA_Achr9G22600_001 I
GSMUA_AchrUn_randomG01280_001 Musa acuminata GSMUA_AchrUn_randomG01280_001 I
LPERR01G32110 Leersia perrieri LPERR01G32110 I
LPERR02G05810 Leersia perrieri LPERR02G05810 I
LPERR06G18380 Leersia perrieri LPERR06G18380 I
LPERR09G00910 Leersia perrieri LPERR09G00910 I
MLOC_64817 Hordeum vulgare MLOC_64817 I
MLOC_7426 Hordeum vulgare MLOC_7426 I
MTR_4g094982 Medicago truncatula MTR_4g094982 I
MTR_5g016510 Medicago truncatula MTR_5g016510 I
MTR_6g015455 Medicago truncatula MTR_6g015455 I
OB01G46120 Oryza brachyantha OB01G46120 I
OB09G10200 Oryza brachyantha OB09G10200 I
OBART01G37390 Oryza barthii OBART01G37390 I
OBART09G00310 Oryza barthii OBART09G00310 I
OGLUM01G41330 Oryza glumaepatula OGLUM01G41330 I
OGLUM02G06640 Oryza glumaepatula OGLUM02G06640 I
OGLUM06G23260 Oryza glumaepatula OGLUM06G23260 I
OGLUM09G00340 Oryza glumaepatula OGLUM09G00340 I
OLONG_001357 Oryza longistaminata OLONG_001357 I
OMERI01G34370 Oryza meridionalis OMERI01G34370 I
OMERI02G07700 Oryza meridionalis OMERI02G07700 I
OMERI06G22090 Oryza meridionalis OMERI06G22090 I
OMERI08G05160 Oryza meridionalis OMERI08G05160 I
ONIVA01G42300 Oryza nivara ONIVA01G42300 I
ONIVA02G08210 Oryza nivara ONIVA02G08210 I
ONIVA06G26080 Oryza nivara ONIVA06G26080 I
ONIVA09G00250 Oryza nivara ONIVA09G00250 I
OPUNC01G36300 Oryza punctata OPUNC01G36300 I
OPUNC02G05820 Oryza punctata OPUNC02G05820 I
OPUNC12G06260 Oryza punctata OPUNC12G06260 I
ORGLA01G0312200 Oryza glaberrima ORGLA01G0312200 I
ORGLA02G0061500 Oryza glaberrima ORGLA02G0061500 I
ORGLA06G0184100 Oryza glaberrima ORGLA06G0184100 I
ORGLA09G0002900 Oryza glaberrima ORGLA09G0002900 I
ORUFI01G40770 Oryza rufipogon ORUFI01G40770 I
ORUFI02G06760 Oryza rufipogon ORUFI02G06760 I
ORUFI06G23790 Oryza rufipogon ORUFI06G23790 I
ORUFI09G00360 Oryza rufipogon ORUFI09G00360 I
OS01G0850400 Oryza sativa OS01G0850400 I
OS06G0637500 Oryza sativa OS06G0637500 I
OS09G0106700 Oryza sativa OS09G0106700 I
PGSC0003DMG400003316 Solanum tuberosum PGSC0003DMG400003316 I
PGSC0003DMG400024983 Solanum tuberosum PGSC0003DMG400024983 I
POPTR_0001s30750 Populus trichocarpa POPTR_0001s30750 I
POPTR_0002s12410 Populus trichocarpa POPTR_0002s12410 I
POPTR_0002s13030 Populus trichocarpa POPTR_0002s13030 I
POPTR_0005s18620 Populus trichocarpa POPTR_0005s18620 I
POPTR_0007s10490 Populus trichocarpa POPTR_0007s10490 I
POPTR_0008s07100 Populus trichocarpa POPTR_0008s07100 I
POPTR_0009s09890 Populus trichocarpa POPTR_0009s09890 I
POPTR_0014s02260 Populus trichocarpa POPTR_0014s02260 I
POPTR_0014s03440 Populus trichocarpa POPTR_0014s03440 I
PRUPE_ppa006851mg Prunus persica PRUPE_ppa006851mg I
PRUPE_ppa008450mg Prunus persica PRUPE_ppa008450mg I
PRUPE_ppa008979mg Prunus persica PRUPE_ppa008979mg I
PRUPE_ppa010735mg Prunus persica PRUPE_ppa010735mg I
PRUPE_ppa017892mg Prunus persica PRUPE_ppa017892mg I
PRUPE_ppa023154mg Prunus persica PRUPE_ppa023154mg I
Sb02g013010 Sorghum bicolor Sb02g013010 I
Sb04g005940 Sorghum bicolor Sb04g005940 I
AtMYB1 Arabidopsis lyrata scaffold_301043.1 I
ATMYBR1 Arabidopsis lyrata scaffold_803378.1 I
SELMODRAFT_103999 Selaginella moellendorffii SELMODRAFT_103999 I
SELMODRAFT_113522 Selaginella moellendorffii SELMODRAFT_113522 I
SELMODRAFT_77255 Selaginella moellendorffii SELMODRAFT_77255 I
SELMODRAFT_99462 Selaginella moellendorffii SELMODRAFT_99462 I
Si001686m.g Setaria italica Si001686m.g I
Si017917m.g Setaria italica Si017917m.g I
Si022959m.g Setaria italica Si022959m.g I
Si032789m.g Setaria italica Si032789m.g I
Solyc02g092930.1 Solanum lycopersicum Solyc02g092930.1 I
Solyc04g078420.1 Solanum lycopersicum Solyc04g078420.1 I
TCM_000696 Theobroma cacao TCM_000696 I
TCM_007138 Theobroma cacao TCM_007138 I
TCM_021796 Theobroma cacao TCM_021796 I
TCM_033907 Theobroma cacao TCM_033907 I
TCM_042474 Theobroma cacao TCM_042474 I
TCM_042629 Theobroma cacao TCM_042629 I
Traes_5BL_486D0D865 Triticum aestivum Traes_5BL_486D0D865 I
Traes_5DL_92CBBE968 Triticum aestivum Traes_5DL_92CBBE968 I
VIT_03s0180g00210 Vitis vinifera VIT_03s0180g00210 I
VIT_07s0129g01050 Vitis vinifera VIT_07s0129g01050 I
VIT_13s0019g03200 Vitis vinifera VIT_13s0019g03200 I
VIT_13s0067g01360 Vitis vinifera VIT_13s0067g01360 I
VIT_18s0001g09850 Vitis vinifera VIT_18s0001g09850 I
Ca_01522 Cicer arietinum Ca_01522 I
Ca_02182 Cicer arietinum Ca_02182 I
Ca_12468 Cicer arietinum Ca_12468 I
Cla004431 Citrullus lanatus Cla004431 I
Cla006872 Citrullus lanatus Cla006872 I
Cla014191 Citrullus lanatus Cla014191 I
Cla020946 Citrullus lanatus Cla020946 I
Cla021015 Citrullus lanatus Cla021015 I
Cla022889 Citrullus lanatus Cla022889 I
Cla022947 Citrullus lanatus Cla022947 I
Pm002576 Prunus mume Pm002576 I
Pm005220 Prunus mume Pm005220 I
Pm005332 Prunus mume Pm005332 I
Pm018862 Prunus mume Pm018862 I
Pm018951 Prunus mume Pm018951 I
Pm021211 Prunus mume Pm021211 I
29801.m003096 Ricinus communis 29801.m003096 I
29814.m000736 Ricinus communis 29814.m000736 I
29970.m000987 Ricinus communis 29970.m000987 I
30170.m013698 Ricinus communis 30170.m013698 I
30170.m013927 Ricinus communis 30170.m013927 I
cassava1242.valid.m1 Manihot esculenta cassava1242.valid.m1 I
cassava16103.m1 Manihot esculenta cassava16103.m1 I
cassava2215.valid.m1 Manihot esculenta cassava2215.valid.m1 I
cassava41257.m1 Manihot esculenta cassava41257.m1 I
cassava43120.valid.m1 Manihot esculenta cassava43120.valid.m1 I
cassava46434.m1 Manihot esculenta cassava46434.m1 I
cassava47374.m1 Manihot esculenta cassava47374.m1 I
cassava8939.m1 Manihot esculenta cassava8939.m1 I
Cucsa.073130 Cucumis sativus Cucsa.073130 I
Cucsa.102710 Cucumis sativus Cucsa.102710 I
Cucsa.123440 Cucumis sativus Cucsa.123440 I
Cucsa.232630 Cucumis sativus Cucsa.232630 I
Cucsa.352560 Cucumis sativus Cucsa.352560 I
Cucsa.368410 Cucumis sativus Cucsa.368410 I
Cucsa.395890 Cucumis sativus Cucsa.395890 I
e_gw1.53.214.1 Physcomitrella patens e_gw1.53.214.1 I
e_gw1.72.10.1 Physcomitrella patens e_gw1.72.10.1 I
e_gw1.9.342.1 Physcomitrella patens e_gw1.9.342.1 I
gw1.10.6.1 Physcomitrella patens gw1.10.6.1 I
mgf002573m Mimulus guttatus mgf002573m I
mgf003084m Mimulus guttatus mgf003084m I
mgf014089m Mimulus guttatus mgf014089m I
mgf020432m Mimulus guttatus mgf020432m I
mgf023922m Mimulus guttatus mgf023922m I
mgf025567m Mimulus guttatus mgf025567m I
Aquca_007_00776 Aquilegia coerulea Aquca_007_00776 I
Aquca_009_00809 Aquilegia coerulea Aquca_009_00809 I
Aquca_045_00169 Aquilegia coerulea Aquca_045_00169 I
Aquca_083_00054 Aquilegia coerulea Aquca_083_00054 I
Bostr.0568s0154 Boechera stricta Bostr.0568s0154 I
Bostr.20505s0177 Boechera stricta Bostr.20505s0177 I
Bostr.22252s0145 Boechera stricta Bostr.22252s0145 I
Bostr.23794s0078 Boechera stricta Bostr.23794s0078 I
Bostr.27895s0157 Boechera stricta Bostr.27895s0157 I
Bostr.6864s0236 Boechera stricta Bostr.6864s0236 I
Bostr.7867s1585 Boechera stricta Bostr.7867s1585 I
Cagra.0342s0017 Capsella grandiflora Cagra.0342s0017 I
Cagra.10445s0001 Capsella grandiflora Cagra.10445s0001 I
Cagra.1232s0025 Capsella grandiflora Cagra.1232s0025 I
Cagra.1549s0005 Capsella grandiflora Cagra.1549s0005 I
Carubv10007638m.g Capsella rubella Carubv10007638m.g I
Carubv10019440m.g Capsella rubella Carubv10019440m.g I
Carubv10023414m.g Capsella rubella Carubv10023414m.g I
Carubv10023692m.g Capsella rubella Carubv10023692m.g I
Carubv10027659m.g Capsella rubella Carubv10027659m.g I
Ciclev10001979m.g Citrus clementina Ciclev10001979m.g I
Ciclev10002239m.g Citrus clementina Ciclev10002239m.g I
Ciclev10026107m.g Citrus clementina Ciclev10026107m.g I
Ciclev10029124m.g Citrus clementina Ciclev10029124m.g I
Ciclev10032317m.g Citrus clementina Ciclev10032317m.g I
Eucgr.E02958 Eucalyptus grandis Eucgr.E02958 I
Eucgr.F00002 Eucalyptus grandis Eucgr.F00002 I
Eucgr.F00031 Eucalyptus grandis Eucgr.F00031 I
Eucgr.F02372 Eucalyptus grandis Eucgr.F02372 I
Eucgr.H02226 Eucalyptus grandis Eucgr.H02226 I
Eucgr.J00189 Eucalyptus grandis Eucgr.J00189 I
Eucgr.J00250 Eucalyptus grandis Eucgr.J00250 I
Eucgr.K03010 Eucalyptus grandis Eucgr.K03010 I
evm.TU.supercontig_19.238 Carica papaya evm.TU.supercontig_19.238 I
evm.TU.supercontig_21.145 Carica papaya evm.TU.supercontig_21.145 I
evm.TU.supercontig_376.4 Carica papaya evm.TU.supercontig_376.4 I
evm.TU.supercontig_56.79 Carica papaya evm.TU.supercontig_56.79 I
evm.TU.supercontig_6.98 Carica papaya evm.TU.supercontig_6.98 I
gene00185-v1.0-hybrid Fragaria vesca gene00185-v1.0-hybrid I
gene09039-v1.0-hybrid Fragaria vesca gene09039-v1.0-hybrid I
gene21001-v1.0-hybrid Fragaria vesca gene21001-v1.0-hybrid I
gene24027-v1.0-hybrid Fragaria vesca gene24027-v1.0-hybrid I
gene26289-v1.0-hybrid Fragaria vesca gene26289-v1.0-hybrid I
Gorai.002G009300 Gossypium raimondii Gorai.002G009300 I
Gorai.005G234900 Gossypium raimondii Gorai.005G234900 I
Gorai.006G179700 Gossypium raimondii Gorai.006G179700 I
Gorai.007G055600 Gossypium raimondii Gorai.007G055600 I
Gorai.007G218100 Gossypium raimondii Gorai.007G218100 I
Gorai.009G208900 Gossypium raimondii Gorai.009G208900 I
Gorai.009G215900 Gossypium raimondii Gorai.009G215900 I
Gorai.009G275100 Gossypium raimondii Gorai.009G275100 I
Gorai.009G276400 Gossypium raimondii Gorai.009G276400 I
Gorai.010G023500 Gossypium raimondii Gorai.010G023500 I
Gorai.011G278500 Gossypium raimondii Gorai.011G278500 I
Gorai.012G078200 Gossypium raimondii Gorai.012G078200 I
Gorai.012G149000 Gossypium raimondii Gorai.012G149000 I
Lus10007503.g Linum usitatissimum Lus10007503.g I
Lus10010055.g Linum usitatissimum Lus10010055.g I
Lus10010238.g Linum usitatissimum Lus10010238.g I
Lus10010260.g Linum usitatissimum Lus10010260.g I
Lus10021762.g Linum usitatissimum Lus10021762.g I
Lus10028250.g Linum usitatissimum Lus10028250.g I
Lus10028979.g Linum usitatissimum Lus10028979.g I
Lus10030336.g Linum usitatissimum Lus10030336.g I
Lus10032764.g Linum usitatissimum Lus10032764.g I
Lus10040239.g Linum usitatissimum Lus10040239.g I
Lus10040940.g Linum usitatissimum Lus10040940.g I
MDP0000187872 Malus domestica MDP0000187872 I
MDP0000196986 Malus domestica MDP0000196986 I
MDP0000232454 Malus domestica MDP0000232454 I
MDP0000275800 Malus domestica MDP0000275800 I
MDP0000298689 Malus domestica MDP0000298689 I
MDP0000463846 Malus domestica MDP0000463846 I
MDP0000477900 Malus domestica MDP0000477900 I
MDP0000480596 Malus domestica MDP0000480596 I
MDP0000641708 Malus domestica MDP0000641708 I
MDP0000784297 Malus domestica MDP0000784297 I
MDP0000823270 Malus domestica MDP0000823270 I
MDP0000894463 Malus domestica MDP0000894463 I
orange1.1g021071m.g Citrus sinensis orange1.1g021071m.g I
orange1.1g022144m.g Citrus sinensis orange1.1g022144m.g I
orange1.1g025351m.g Citrus sinensis orange1.1g025351m.g I
orange1.1g040502m.g Citrus sinensis orange1.1g040502m.g I
orange1.1g046570m.g Citrus sinensis orange1.1g046570m.g I
Pavir.Ab00649 Panicum virgatum Pavir.Ab00649 I
Pavir.Ba03084 Panicum virgatum Pavir.Ba03084 I
Pavir.J23512 Panicum virgatum Pavir.J23512 I
SapurV1A.0017s0390 Salix purpurea SapurV1A.0017s0390 I
SapurV1A.0167s0310 Salix purpurea SapurV1A.0167s0310 I
SapurV1A.0262s0270 Salix purpurea SapurV1A.0262s0270 I
SapurV1A.0339s0020 Salix purpurea SapurV1A.0339s0020 I
SapurV1A.0525s0230 Salix purpurea SapurV1A.0525s0230 I
SapurV1A.0597s0060 Salix purpurea SapurV1A.0597s0060 I
SapurV1A.0650s0070 Salix purpurea SapurV1A.0650s0070 I
SapurV1A.0708s0130 Salix purpurea SapurV1A.0708s0130 I
SapurV1A.0709s0060 Salix purpurea SapurV1A.0709s0060 I
SapurV1A.0919s0160 Salix purpurea SapurV1A.0919s0160 I
SapurV1A.1934s0020 Salix purpurea SapurV1A.1934s0020 I
Thhalv10000438m.g Eutrema salsugineum Thhalv10000438m.g I
Thhalv10004676m.g Eutrema salsugineum Thhalv10004676m.g I
Thhalv10010431m.g Eutrema salsugineum Thhalv10010431m.g I
Thhalv10010581m.g Eutrema salsugineum Thhalv10010581m.g I
Thhalv10016794m.g Eutrema salsugineum Thhalv10016794m.g I
Thhalv10021963m.g Eutrema salsugineum Thhalv10021963m.g I
Thhalv10025742m.g Eutrema salsugineum Thhalv10025742m.g I
PK01153.1 Cannabis sativa PK01153.1 I
PK16550.1 Cannabis sativa PK16550.1 I
PK17282.1 Cannabis sativa PK17282.1 I
chr2.CM0002.110.nc Lotus japonicus chr2.CM0002.110.nc I
chr2.CM0250.240.nd Lotus japonicus chr2.CM0250.240.nd I
chr5.CM0096.100.nc Lotus japonicus chr5.CM0096.100.nc I
CM0528.210.nd Lotus japonicus CM0528.210.nd I