CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSLACG00000008338
(
Latimeria chalumnae
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSLACG00000008338
T034816_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
MYCN
M04128_2.00
Homo sapiens
NVCACGTGNN
NNCACGTGBN
SELEX
Yin et al.(2017)
MYCN_eDBD_HT-SELEX
0.841
0.962
MYCN
M08053_2.00
Homo sapiens
NNCCACGTGGNN
NNCCACGTGGNN
ChIP-seq
Mathelier et al.(2014)
MA0104.4
0.841
0.962
MYCN
M08727_2.00
Homo sapiens
BHSCACGTGBYB
VRVCACGTGSDV
Misc
Kulakovskiy et al.(2013)
MYCN_HUMAN.H11MO.0.A
0.841
0.962
MYCN
M09846_2.00
Homo sapiens
NNVCACGTGNHN
NDNCACGTGBNN
Transfac
Matys et al.(2006)
V$NMYC_01
0.841
0.962
MYCN
M09847_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NMYC_02
0.841
0.962
MYCN
M09848_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$NMYC_Q3
0.841
0.962
Mycn
M08768_2.00
Mus musculus
MCACGYGV
BCRCGTGK
Misc
Kulakovskiy et al.(2013)
MYCN_MOUSE.H11MO.0.A
0.841
0.943
Mycn
M09476_2.00
Mus musculus
SCACGTGSNN
NNSCACGTGS
Misc
Heinz et al.(2010)
mES-nMyc_GSE11431
0.841
0.943
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSLACP00000009455
bHLH
335
387
RRRNHNILERQRRNDLRSSFLTLRDHVPELIKNEKAAKVVILKKATEFVHSLQ
Links
Other
bHLH
family TFs
Other
Latimeria chalumnae
TFs
48 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
TEAD2
Homo sapiens
ENSG00000074219
D
0.000
TEAD1
Homo sapiens
ENSG00000187079
D
0.000
TEAD4
Homo sapiens
ENSG00000197905
D
0.000
Tead4
Mus musculus
ENSMUSG00000030353
D
0.000
Tead2
Mus musculus
ENSMUSG00000030796
D
0.000
Tead1
Mus musculus
ENSMUSG00000055320
D
0.000
sd
Drosophila melanogaster
FBgn0003345
D
0.000
ENSTNIG00000008857_CONSTRUCT
PBM CONSTRUCTS
ENSTNIG00000008857_CONSTRUCT
D
0.000
AAEL014670
Aedes aegypti
AAEL014670
I
0.000
AGAP000512
Anopheles gambiae
AGAP000512
I
0.000
Aqu1.216869
Amphimedon queenslandica
Aqu1.216869
I
0.000
BGIBMGA001129
Bombyx mori
BGIBMGA001129
I
0.000
CBG02541
Caenorhabditis briggsae
CBG02541
I
0.000
CBN00477
Caenorhabditis brenneri
CBN00477
I
0.000
CBN16859
Caenorhabditis brenneri
CBN16859
I
0.000
CJA07640
Caenorhabditis japonica
CJA07640
I
0.000
TEAD1
Anolis carolinensis
ENSACAG00000004642
I
0.000
TEAD3
Anolis carolinensis
ENSACAG00000009142
I
0.000
TEAD2
Anolis carolinensis
ENSACAG00000017423
I
0.000
ENSAMEG00000000632
Ailuropoda melanoleuca
ENSAMEG00000000632
I
0.000
ENSAMEG00000014183
Ailuropoda melanoleuca
ENSAMEG00000014183
I
0.000
ENSAMXG00000010081
Astyanax mexicanus
ENSAMXG00000010081
I
0.000
ENSAMXG00000013086
Astyanax mexicanus
ENSAMXG00000013086
I
0.000
TEAD2
Bos taurus
ENSBTAG00000016349
I
0.000
TEAD3
Bos taurus
ENSBTAG00000019495
I
0.000
TEAD3
Canis familiaris
ENSCAFG00000001326
I
0.000
TEAD2
Canis familiaris
ENSCAFG00000003698
I
0.000
TEAD1
Canis familiaris
ENSCAFG00000007976
I
0.000
ENSCING00000019408
Ciona intestinalis
ENSCING00000019408
I
0.000
TEAD2
Callithrix jacchus
ENSCJAG00000000104
I
0.000
TEAD1
Callithrix jacchus
ENSCJAG00000010263
I
0.000
ENSCJAG00000018829
Callithrix jacchus
ENSCJAG00000018829
I
0.000
TEAD4
Callithrix jacchus
ENSCJAG00000023239
I
0.000
TEAD2
Cavia porcellus
ENSCPOG00000011572
I
0.000
TEAD4
Cavia porcellus
ENSCPOG00000020720
I
0.000
ENSCSAG00000002642
Chlorocebus sabaeus
ENSCSAG00000002642
I
0.000
ENSCSAG00000004676
Chlorocebus sabaeus
ENSCSAG00000004676
I
0.000
ENSCSAVG00000007634
Ciona savignyi
ENSCSAVG00000007634
I
0.000
tead1a
Danio rerio
ENSDARG00000028159
I
0.000
tead3b
Danio rerio
ENSDARG00000063649
I
0.000
TEAD3
Dasypus novemcinctus
ENSDNOG00000023623
I
0.000
TEAD4
Dasypus novemcinctus
ENSDNOG00000030589
I
0.000
TEAD1
Equus caballus
ENSECAG00000008332
I
0.000
TEAD4
Equus caballus
ENSECAG00000011303
I
0.000
TEAD3
Equus caballus
ENSECAG00000015056
I
0.000
TEAD2
Equus caballus
ENSECAG00000018010
I
0.000
ENSEEUG00000001836
Erinaceus europaeus
ENSEEUG00000001836
I
0.000
TEAD2
Erinaceus europaeus
ENSEEUG00000012244
I
0.000
ENSFALG00000003635
Ficedula albicollis
ENSFALG00000003635
I
0.000
TEAD2
Felis catus
ENSFCAG00000001523
I
0.000
tead1a
Gasterosteus aculeatus
ENSGACG00000003385
I
0.000
tead3a
Gasterosteus aculeatus
ENSGACG00000009758
I
0.000
tead1b
Gasterosteus aculeatus
ENSGACG00000015715
I
0.000
ENSGALG00000000953
Gallus gallus
ENSGALG00000000953
I
0.000
TEAD1
Gallus gallus
ENSGALG00000005415
I
0.000
TEAD3
Gorilla gorilla
ENSGGOG00000001847
I
0.000
TEAD4
Gorilla gorilla
ENSGGOG00000006216
I
0.000
TEAD2
Gorilla gorilla
ENSGGOG00000016367
I
0.000
ENSGMOG00000007916
Gadus morhua
ENSGMOG00000007916
I
0.000
ENSGMOG00000010731
Gadus morhua
ENSGMOG00000010731
I
0.000
ENSLACG00000013349
Latimeria chalumnae
ENSLACG00000013349
I
0.000
ENSLACG00000016444
Latimeria chalumnae
ENSLACG00000016444
I
0.000
TEAD4
Loxodonta africana
ENSLAFG00000006998
I
0.000
TEAD3
Loxodonta africana
ENSLAFG00000014818
I
0.000
TEAD2
Loxodonta africana
ENSLAFG00000016184
I
0.000
ENSLOCG00000004054
Lepisosteus oculatus
ENSLOCG00000004054
I
0.000
ENSLOCG00000009736
Lepisosteus oculatus
ENSLOCG00000009736
I
0.000
TEAD4
Meleagris gallopavo
ENSMGAG00000013910
I
0.000
TEAD4
Microcebus murinus
ENSMICG00000000108
I
0.000
TEAD2
Macaca mulatta
ENSMMUG00000014791
I
0.000
ENSMPUG00000002689
Mustela putorius furo
ENSMPUG00000002689
I
0.000
ENSMPUG00000003624
Mustela putorius furo
ENSMPUG00000003624
I
0.000
ENSMPUG00000013114
Mustela putorius furo
ENSMPUG00000013114
I
0.000
ENSNLEG00000005091
Nomascus leucogenys
ENSNLEG00000005091
I
0.000
TEAD4
Ornithorhynchus anatinus
ENSOANG00000001389
I
0.000
ENSOARG00000008069
Ovis aries
ENSOARG00000008069
I
0.000
TEAD1
Oryctolagus cuniculus
ENSOCUG00000007955
I
0.000
TEAD2
Oryctolagus cuniculus
ENSOCUG00000008758
I
0.000
TEAD3
Otolemur garnettii
ENSOGAG00000002943
I
0.000
TEAD4
Otolemur garnettii
ENSOGAG00000005199
I
0.000
ENSONIG00000011013
Oreochromis niloticus
ENSONIG00000011013
I
0.000
ENSONIG00000012323
Oreochromis niloticus
ENSONIG00000012323
I
0.000
ENSONIG00000014698
Oreochromis niloticus
ENSONIG00000014698
I
0.000
TEAD4
Oryzias latipes
ENSORLG00000002553
I
0.000
tead1b
Oryzias latipes
ENSORLG00000007439
I
0.000
ENSPANG00000023792
Papio anubis
ENSPANG00000023792
I
0.000
TEAD2
Procavia capensis
ENSPCAG00000003576
I
0.000
TEAD3
Procavia capensis
ENSPCAG00000010213
I
0.000
TEAD1
Procavia capensis
ENSPCAG00000013657
I
0.000
TEAD4
Procavia capensis
ENSPCAG00000013738
I
0.000
ENSPFOG00000009547
Poecilia formosa
ENSPFOG00000009547
I
0.000
ENSPFOG00000013997
Poecilia formosa
ENSPFOG00000013997
I
0.000
ENSPPYG00000003475
Pongo abelii
ENSPPYG00000003475
I
0.000
ENSPPYG00000010243
Pongo abelii
ENSPPYG00000010243
I
0.000
ENSPPYG00000016530
Pongo abelii
ENSPPYG00000016530
I
0.000
ENSPSIG00000006176
Pelodiscus sinensis
ENSPSIG00000006176
I
0.000
TEAD2
Pan troglodytes
ENSPTRG00000011290
I
0.000
TEAD1
Pteropus vampyrus
ENSPVAG00000001503
I
0.000
TEAD3
Pteropus vampyrus
ENSPVAG00000002764
I
0.000
TEAD2
Pteropus vampyrus
ENSPVAG00000010945
I
0.000
TEAD4
Pteropus vampyrus
ENSPVAG00000013230
I
0.000
Tead1
Rattus norvegicus
ENSRNOG00000015488
I
0.000
Tead2
Rattus norvegicus
ENSRNOG00000020695
I
0.000
TEAD3
Sorex araneus
ENSSARG00000008305
I
0.000
ENSSHAG00000012780
Sarcophilus harrisii
ENSSHAG00000012780
I
0.000
TEAD4
Sus scrofa
ENSSSCG00000000736
I
0.000
TEAD3
Sus scrofa
ENSSSCG00000001544
I
0.000
TEAD2
Sus scrofa
ENSSSCG00000025568
I
0.000
ENSSTOG00000010621
Ictidomys tridecemlineatus
ENSSTOG00000010621
I
0.000
ENSSTOG00000012695
Ictidomys tridecemlineatus
ENSSTOG00000012695
I
0.000
ENSSTOG00000024296
Ictidomys tridecemlineatus
ENSSTOG00000024296
I
0.000
TEAD3
Taeniopygia guttata
ENSTGUG00000001691
I
0.000
tead1a
Tetraodon nigroviridis
ENSTNIG00000008857
I
0.000
tead1a
Takifugu rubripes
ENSTRUG00000005940
I
0.000
tead3a
Takifugu rubripes
ENSTRUG00000011546
I
0.000
TEAD4
Takifugu rubripes
ENSTRUG00000016489
I
0.000
tead3b
Takifugu rubripes
ENSTRUG00000018177
I
0.000
ENSTSYG00000006048
Tarsius syrichta
ENSTSYG00000006048
I
0.000
ENSXMAG00000008189
Xiphophorus maculatus
ENSXMAG00000008189
I
0.000
ENSXMAG00000015423
Xiphophorus maculatus
ENSXMAG00000015423
I
0.000
GA21152
Drosophila pseudoobscura
FBgn0081140
I
0.000
GF20188
Drosophila ananassae
FBgn0097195
I
0.000
GG17919
Drosophila erecta
FBgn0110139
I
0.000
GH12522
Drosophila grimshawi
FBgn0120001
I
0.000
GI14876
Drosophila mojavensis
FBgn0137627
I
0.000
GL22923
Drosophila persimilis
FBgn0160513
I
0.000
GM22588
Drosophila sechellia
FBgn0177458
I
0.000
GJ19539
Drosophila virilis
FBgn0206682
I
0.000
GE17227
Drosophila yakuba
FBgn0234705
I
0.000
HelroG146479
Helobdella robusta
HelroG146479
I
0.000
LotgiG210691
Lottia gigantea
LotgiG210691
I
0.000
tetur34g00910
Tetranychus urticae
tetur34g00910
I
0.000
egl-44
Caenorhabditis elegans
WBGene00001208
I
0.000
Aan_R003816
Calypte anna
Aan_R003816
I
0.000
Alligator_sinensis_CCG011289.1
Alligator sinensis
Alligator_sinensis_CCG011289.1
I
0.000
Alligator_sinensis_CCG020461.1
Alligator sinensis
Alligator_sinensis_CCG020461.1
I
0.000
Cmyd_10014175
Chelonia mydas
Cmyd_10014175
I
0.000
ENSMMUP00000031528
Macaca fascicularis
ENSMMUP00000031528
I
0.000
ENSP00000310701-D4
Bos grunniens
ENSP00000310701-D4
I
0.000
ENSP00000349828
Macaca fascicularis
ENSP00000349828
I
0.000
Myotis_brandtii_TEAD2_10017641
Myotis brandtii
Myotis_brandtii_TEAD2_10017641
I
0.000
Myotis_brandtii_TEAD4_10028679
Myotis brandtii
Myotis_brandtii_TEAD4_10028679
I
0.000
Ogr11772
Ophisaurus gracilis
Ogr11772
I
0.000
Pvit_04865
Pogona vitticeps
Pvit_04865
I
0.000
Pvit_05988
Pogona vitticeps
Pvit_05988
I
0.000
CLEC025393
Cimex lectularius
CLEC025393
I
0.000
tead1
Xenopus tropicalis
XB-GENE-5909149
I
0.000
tead4
Xenopus tropicalis
XB-GENE-956369
I
0.000
XP_002943057
Xenopus tropicalis
XP_002943057
I
0.000
MDOA005382
Musca domestica
MDOA005382
I
0.000
A_05340
Schistosoma haematobium
A_05340
I
0.000
TsM_000210300
Taenia solium
TsM_000210300
I
0.000
WUBG_04000
Wuchereria bancrofti
WUBG_04000
N
0.000
ACYPI001652
Acyrthosiphon pisum
ACYPI001652
N
0.000
Bm3663
Brugia malayi
Bm3663
N
0.000
ENSAMEG00000004909
Ailuropoda melanoleuca
ENSAMEG00000004909
N
0.000
ENSAMXG00000013625
Astyanax mexicanus
ENSAMXG00000013625
N
0.000
ENSAPLG00000010018
Anas platyrhynchos
ENSAPLG00000010018
N
0.000
ENSAPLG00000016417
Anas platyrhynchos
ENSAPLG00000016417
N
0.000
TEAD1
Choloepus hoffmanni
ENSCHOG00000001087
N
0.000
TEAD3
Callithrix jacchus
ENSCJAG00000015661
N
0.000
tead3a
Danio rerio
ENSDARG00000074321
N
0.000
Tead1
Dipodomys ordii
ENSDORG00000013529
N
0.000
TEAD4
Felis catus
ENSFCAG00000000150
N
0.000
TEAD4
Gasterosteus aculeatus
ENSGACG00000003761
N
0.000
tead3b
Gasterosteus aculeatus
ENSGACG00000005144
N
0.000
TEAD4
Gallus gallus
ENSGALG00000014342
N
0.000
TEAD1
Gorilla gorilla
ENSGGOG00000003412
N
0.000
ENSGMOG00000004752
Gadus morhua
ENSGMOG00000004752
N
0.000
ENSMEUG00000003932
Macropus eugenii
ENSMEUG00000003932
N
0.000
ENSMEUG00000006301
Macropus eugenii
ENSMEUG00000006301
N
0.000
ENSMGAG00000000674
Meleagris gallopavo
ENSMGAG00000000674
N
0.000
TEAD1
Macaca mulatta
ENSMMUG00000010875
N
0.000
Tead3
Mus musculus
ENSMUSG00000002249
N
0.000
ENSNLEG00000017672
Nomascus leucogenys
ENSNLEG00000017672
N
0.000
TEAD2
Ornithorhynchus anatinus
ENSOANG00000013933
N
0.000
ENSOARG00000012881
Ovis aries
ENSOARG00000012881
N
0.000
ENSONIG00000005991
Oreochromis niloticus
ENSONIG00000005991
N
0.000
TEAD4
Ochotona princeps
ENSOPRG00000015460
N
0.000
tead3b
Oryzias latipes
ENSORLG00000006370
N
0.000
ENSPFOG00000011847
Poecilia formosa
ENSPFOG00000011847
N
0.000
ENSPFOG00000012196
Poecilia formosa
ENSPFOG00000012196
N
0.000
ENSPSIG00000017283
Pelodiscus sinensis
ENSPSIG00000017283
N
0.000
TEAD1
Pan troglodytes
ENSPTRG00000039896
N
0.000
ENSSARG00000008050
Sorex araneus
ENSSARG00000008050
N
0.000
TEAD4
Taeniopygia guttata
ENSTGUG00000013161
N
0.000
TEAD1
Taeniopygia guttata
ENSTGUG00000015995
N
0.000
TEAD4
Tetraodon nigroviridis
ENSTNIG00000003414
N
0.000
tead1b
Tetraodon nigroviridis
ENSTNIG00000009360
N
0.000
tead3b
Tetraodon nigroviridis
ENSTNIG00000018296
N
0.000
tead1b
Takifugu rubripes
ENSTRUG00000017473
N
0.000
ENSTSYG00000001514
Tarsius syrichta
ENSTSYG00000001514
N
0.000
TEAD1
Tursiops truncatus
ENSTTRG00000006621
N
0.000
TEAD4
Tursiops truncatus
ENSTTRG00000007774
N
0.000
TEAD1
Vicugna pacos
ENSVPAG00000005288
N
0.000
ENSVPAG00000012068
Vicugna pacos
ENSVPAG00000012068
N
0.000
ENSXMAG00000003088
Xiphophorus maculatus
ENSXMAG00000003088
N
0.000
ENSXMAG00000018099
Xiphophorus maculatus
ENSXMAG00000018099
N
0.000
HelroG156770
Helobdella robusta
HelroG156770
N
0.000
HelroG91681
Helobdella robusta
HelroG91681
N
0.000
ISCW001055
Ixodes scapularis
ISCW001055
N
0.000
L798_06691
Zootermopsis nevadensis
L798_06691
N
0.000
LOAG_16930
Loa loa
LOAG_16930
N
0.000
ML20029a
Mnemiopsis leidyi
ML20029a
N
0.000
NEMVEDRAFT_v1g212385
Nematostella vectensis
NEMVEDRAFT_v1g212385
N
0.000
NV15824
Nasonia vitripennis
NV15824
N
0.000
PHUM251000
Pediculus humanus
PHUM251000
N
0.000
Ppa-egl-44
Pristionchus pacificus
PPA23431
N
0.000
Smp_066050
Schistosoma mansoni
Smp_066050
N
0.000
Aan_R006597
Calypte anna
Aan_R006597
N
0.000
Aan_R012086
Calypte anna
Aan_R012086
N
0.000
Afo_R008073
Aptenodytes forsteri
Afo_R008073
N
0.000
Afo_R014607
Aptenodytes forsteri
Afo_R014607
N
0.000
Alligator_sinensis_CCG004256.1
Alligator sinensis
Alligator_sinensis_CCG004256.1
N
0.000
Brh_R000244
Buceros rhinoceros
Brh_R000244
N
0.000
Cmyd_10011168
Chelonia mydas
Cmyd_10011168
N
0.000
ENSBTAP00000021752-D1
Bos grunniens
ENSBTAP00000021752-D1
N
0.000
ENSP00000349828-D1
Bos grunniens
ENSP00000349828-D1
N
0.000
ENSP00000352926
Macaca fascicularis
ENSP00000352926
N
0.000
ENSP00000355332
Macaca fascicularis
ENSP00000355332
N
0.000
Gfo_R008443
Geospiza fortis
Gfo_R008443
N
0.000
Gfo_R013616
Geospiza fortis
Gfo_R013616
N
0.000
fgenesh2_pg.scaffold_14000134
Monosiga brevicollis
fgenesh2_pg.scaffold_14000134
N
0.000
Sjc_0026250
Schistosoma japonicum
Sjc_0026250
N
0.000
SMU15001290
Schmidtea mediterranea
SMU15001290
N
0.000
SMU15036748
Schmidtea mediterranea
SMU15036748
N
0.000
Minc08587
Meloidogyne incognita
Minc08587
N
0.000
XP_002160172.1
Hydra magnipapillata
XP_002160172.1
N
0.000
AALB006731
Anopheles albimanus
AALB006731
N
0.000
ACOM033640
Anopheles coluzzii
ACOM033640
N
0.000
AFAF008476
Anopheles farauti
AFAF008476
N
0.000
BXY_1123500
Bursaphelenchus xylophilus
BXY_1123500
N
0.000
csin107014
Clonorchis sinensis
csin107014
N
0.000
D915_04738
Fasciola hepatica
D915_04738
N
0.000
GPLIN_000239200
Globodera pallida
GPLIN_000239200
N
0.000
HmN_000010800
Hymenolepis microstoma
HmN_000010800
N
0.000
HmN_000661200
Hymenolepis microstoma
HmN_000661200
N
0.000
L889_g27469
Steinernema feltiae
L889_g27469
N
0.000
L892_g28430
Steinernema scapterisci
L892_g28430
N
0.000
L893_g28603
Steinernema glaseri
L893_g28603
N
0.000
L898_g3313
Steinernema monticolum
L898_g3313
N
0.000
maker-nMf.1.1.scaf11367-augustus-gene-0.3
Meloidogyne floridensis
maker-nMf.1.1.scaf11367-augustus-gene-0.3
N
0.000
MhA1_Contig1858.frz3.gene4
Meloidogyne hapla
MhA1_Contig1858.frz3.gene4
N
0.000
nAv.1.0.1.g09844
Acanthocheilonema viteae
nAv.1.0.1.g09844
N
0.000
nOo.2.0.1.g04457
Onchocerca ochengi
nOo.2.0.1.g04457
N
0.000
PTRK_0001645900
Parastrongyloides trichosuri
PTRK_0001645900
N
0.000
RSKR_0000765700
Rhabditophanes kr3021
RSKR_0000765700
N
0.000
SMTD_0000596101
Schistosoma mattheei
SMTD_0000596101
N
0.000
SPAL_0001147900
Strongyloides papillosus
SPAL_0001147900
N
0.000
SPAL_0001402900
Strongyloides papillosus
SPAL_0001402900
N
0.000
SSTP_0001098000
Strongyloides stercoralis
SSTP_0001098000
N
0.000
SVE_1986900
Strongyloides venezuelensis
SVE_1986900
N
0.000
TMUE_s0021001300
Trichuris muris
TMUE_s0021001300
N
0.000