ENSLACG00000010712 (Latimeria chalumnae)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSLACG00000010712 T034825_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
ASCL1
M04135_2.00 		Homo sapiens
NRCASSTGYN
NRCASSTGYN		 SELEX
Yin et al.(2017)
ASCL1_eDBD_HT-SELEX 		0.894 0.980
ASCL1
M08055_2.00 		Homo sapiens
NNRGCAGCTGSNN
NNSCAGCTGCYNN		 ChIP-seq
Mathelier et al.(2014)
MA1100.1 		0.894 0.980
ASCL1
M08730_2.00 		Homo sapiens
NNVCASCTGCYBYN
NRVRGCAGSTGBNN		 Misc
Kulakovskiy et al.(2013)
ASCL1_HUMAN.H11MO.0.A 		0.894 0.980
Ascl1
M08748_2.00 		Mus musculus
BHSCASCTGCYBBN
NVVRGCAGSTGSDV		 Misc
Kulakovskiy et al.(2013)
ASCL1_MOUSE.H11MO.0.A 		0.894 0.980
Ascl1
M09464_2.00 		Mus musculus
NVCABCTGBBNN
NNVVCAGVTGBN		 Misc
Heinz et al.(2010)
NeuralTubes-Ascl1_GSE55840 		0.894 0.980
ASCL1
M09855_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MASH1_Q6_01 		0.894 0.980
ASCL1
M09856_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MASH1_Q6_02 		0.894 0.980
ASCL1
M09857_2.00 		Homo sapiens Transfac license required
 Transfac license required
 Transfac
Matys et al.(2006)
V$MASH1_Q6 		0.894 0.980
ASCL1
M04136_2.00 		Homo sapiens
NRCAGCTGYN
NRCAGCTGYN		 SELEX
Yin et al.(2017)
ASCL1_eDBD_Methyl-HT-SELEX 		0.894 0.980
Ascl2
M00117_2.00 		Mus musculus
NVCABVTGBN
NVCABVTGBN		 PBM
Badis et al.(2009)
Ascl2_2654 		0.851 0.860
Ascl2
M02814_2.00 		Mus musculus
RRCAGCTGYY
RRCAGCTGYY		 SELEX
Jolma et al.(2013)
Ascl2_1 		0.851 0.860
Ascl2
M08744_2.00 		Mus musculus
RGCAGSTGB
VCASCTGCY		 Misc
Kulakovskiy et al.(2013)
ASCL2_MOUSE.H11MO.0.C 		0.851 0.860
ASCL2
M04207_2.00 		Homo sapiens
NRCAGCTGYN
NRCAGCTGYN		 SELEX
Yin et al.(2017)
ASCL2_eDBD_HT-SELEX 		0.851 0.840
ASCL2
M04209_2.00 		Homo sapiens
VCACRACGCD
HGCGTYGTGB		 SELEX
Yin et al.(2017)
ASCL2_FL_HT-SELEX_1 		0.851 0.840
ASCL2
M04210_2.00 		Homo sapiens
NRCAGCTGYN
NRCAGCTGYN		 SELEX
Yin et al.(2017)
ASCL2_FL_HT-SELEX_2 		0.851 0.840
ASCL2
M04208_2.00 		Homo sapiens
NRCAGCTGYN
NRCAGCTGYN		 SELEX
Yin et al.(2017)
ASCL2_eDBD_Methyl-HT-SELEX 		0.851 0.840
ASCL2
M04211_2.00 		Homo sapiens
VRCAGCTGYB
VRCAGCTGYB		 SELEX
Yin et al.(2017)
ASCL2_FL_Methyl-HT-SELEX 		0.851 0.840
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSLACP00000012171 bHLH 83 133

Links

Other bHLH family TFs
Other Latimeria chalumnae TFs

84 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
SMAC_05040 Sordaria macrospora SMAC_05040 N
MGU_03571 Metarhizium guizhouense MGU_03571 N
MYCTH_2313964 Myceliophthora thermophila MYCTH_2313964 N
NEUTE1DRAFT_89140 Neurospora tetrasperma NEUTE1DRAFT_89140 N
OIDMADRAFT_174720 Oidiodendron maius OIDMADRAFT_174720 N
OIDMADRAFT_62312 Oidiodendron maius OIDMADRAFT_62312 N
OIDMADRAFT_62375 Oidiodendron maius OIDMADRAFT_62375 N
PFICI_10667 Pestalotiopsis fici PFICI_10667 N
PODANS_1_17550 Podospora anserina PODANS_1_17550 N
S40288_03133 Stachybotrys chartarum S40288_03133 N
SAPIO_CDS7458 Scedosporium apiospermum SAPIO_CDS7458 N
MGG_03711 Magnaporthe oryzae MGG_03711 N
THITE_2111974 Thielavia terrestris THITE_2111974 N
TRIATDRAFT_127907 Trichoderma atroviride TRIATDRAFT_127907 N
TRIREDRAFT_122523 Trichoderma reesei TRIREDRAFT_122523 N
UV8b_1816 Ustilaginoidea virens UV8b_1816 N
V499_02967 Pseudogymnoascus pannorum V499_02967 N
V499_03539 Pseudogymnoascus pannorum V499_03539 N
VHEMI02872 Torrubiella hemipterigena VHEMI02872 N
estExt_fgenesh3_kg.C_20127 Neurospora discreta estExt_fgenesh3_kg.C_20127 N
NCU02142 Neurospora crassa NCU02142 N
estExt_Genewise1.C_40222 Cryphonectria parasitica estExt_Genewise1.C_40222 N
F503_02282 Ophiostoma piceae uamh F503_02282 N
BBA_09641 Beauveria bassiana BBA_09641 N
CCM_03378 Cordyceps militaris CCM_03378 N
CFIO01_12453 Colletotrichum fioriniae CFIO01_12453 N
CGGC5_5314 Colletotrichum gloeosporioides CGGC5_5314 N
CH063_06178 Colletotrichum higginsianum CH063_06178 N
CHGG_06395 Chaetomium globosum CHGG_06395 N
CMQ_3062 Grosmannia clavigera CMQ_3062 N
Cob_05014 Colletotrichum orbiculare Cob_05014 N
CPUR_05147 Claviceps purpurea CPUR_05147 N
CSUB01_03564 Colletotrichum sublineola CSUB01_03564 N
ACRE_026230 Acremonium chrysogenum ACRE_026230 N
FFUJ_06005 Fusarium fujikuroi FFUJ_06005 N
FOXG_08872 Fusarium oxysporum FOXG_08872 N
GGTG_00991 Gaeumannomyces graminis GGTG_00991 N
GLRG_02520 Colletotrichum graminicola GLRG_02520 N
GMDG_07896 Pseudogymnoascus destructans GMDG_07896 N
HMPREF1624_04956 Sporothrix schenckii HMPREF1624_04956 N
MAJ_03898 Metarhizium majus MAJ_03898 N
MBM_01057 Marssonina brunnea MBM_01057 N
MBR_08021 Metarhizium brunneum MBR_08021 N