CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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PDCD6
(
Macaca mulatta
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSMMUG00000000752
T035372_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No TFs with similar DNA binding domains
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSMMUP00000001012
bHLH
40
87
KSNPSKRHRDRLNAELDHLASLLPFPPDIISKLDKLSVLRLSVSYLRV
Links
Other
bHLH
family TFs
Other
Macaca mulatta
TFs
36 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
RKD2
Arabidopsis thaliana
AT1G74480
D
AMTR_s00057p00091350
Amborella trichopoda
AMTR_s00057p00091350
I
RKD1
Arabidopsis thaliana
AT1G18790
I
BGIOSGA005630
Oryza indica
BGIOSGA005630
I
BGIOSGA022580
Oryza indica
BGIOSGA022580
I
Bo7g064180
Brassica oleracea
Bo7g064180
I
Bra008153
Brassica rapa
Bra008153
I
Bra012122
Brassica rapa
Bra012122
I
Bra015907
Brassica rapa
Bra015907
I
F775_00225
Aegilops tauschii
F775_00225
I
F775_07483
Aegilops tauschii
F775_07483
I
fgenesh1_pg.C_scaffold_2000886
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_2000886
I
fgenesh1_pg.C_scaffold_2001738
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_2001738
I
fgenesh1_pg.C_scaffold_8002648
Arabidopsis lyrata
fgenesh1_pg.C_scaffold_8002648
I
fgenesh2_kg.1__2057__AT1G18790.1
Arabidopsis lyrata
fgenesh2_kg.1__2057__AT1G18790.1
I
GLYMA04G33516
Glycine max
GLYMA04G33516
I
GLYMA05G01030
Glycine max
GLYMA05G01030
I
GLYMA06G20881
Glycine max
GLYMA06G20881
I
GLYMA17G10866
Glycine max
GLYMA17G10866
I
GRMZM2G392306
Zea mays
GRMZM2G392306
I
LPERR06G07570
Leersia perrieri
LPERR06G07570
I
MLOC_12609
Hordeum vulgare
MLOC_12609
I
MLOC_59560
Hordeum vulgare
MLOC_59560
I
MTR_3g435550
Medicago truncatula
MTR_3g435550
I
OB02G39310
Oryza brachyantha
OB02G39310
I
OB06G17750
Oryza brachyantha
OB06G17750
I
OBART02G32320
Oryza barthii
OBART02G32320
I
OGLUM02G32960
Oryza glumaepatula
OGLUM02G32960
I
OLONG_016325
Oryza longistaminata
OLONG_016325
I
OMERI02G30990
Oryza meridionalis
OMERI02G30990
I
OMERI06G09770
Oryza meridionalis
OMERI06G09770
I
ONIVA06G04700
Oryza nivara
ONIVA06G04700
I
ONIVA06G09450
Oryza nivara
ONIVA06G09450
I
OPUNC02G29870
Oryza punctata
OPUNC02G29870
I
OPUNC06G07940
Oryza punctata
OPUNC06G07940
I
ORGLA02G0278600
Oryza glaberrima
ORGLA02G0278600
I
ORUFI02G34010
Oryza rufipogon
ORUFI02G34010
I
ORUFI06G08510
Oryza rufipogon
ORUFI06G08510
I
OS06G0228950
Oryza sativa
OS06G0228950
I
PRUPE_ppa023107mg
Prunus persica
PRUPE_ppa023107mg
I
Sb10g008120
Sorghum bicolor
Sb10g008120
I
scaffold_103100001.1
Arabidopsis lyrata
scaffold_103100001.1
I
Si008273m.g
Setaria italica
Si008273m.g
I
Si020172m.g
Setaria italica
Si020172m.g
I
TCM_014009
Theobroma cacao
TCM_014009
I
Traes_6BL_301505440
Triticum aestivum
Traes_6BL_301505440
I
Traes_6DL_8ECBBC867
Triticum aestivum
Traes_6DL_8ECBBC867
I
Traes_7DS_405F08A53
Triticum aestivum
Traes_7DS_405F08A53
I
TRIUR3_19503
Triticum urartu
TRIUR3_19503
I
VIT_17s0000g06250
Vitis vinifera
VIT_17s0000g06250
I
Ca_13151
Cicer arietinum
Ca_13151
I
Cla019404
Citrullus lanatus
Cla019404
I
Pm024905
Prunus mume
Pm024905
I
30138.m004071
Ricinus communis
30138.m004071
I
cassava35166.m1
Manihot esculenta
cassava35166.m1
I
mg020279m
Mimulus guttatus
mg020279m
I
mgf022310m
Mimulus guttatus
mgf022310m
I
Bostr.3288s0094
Boechera stricta
Bostr.3288s0094
I
Cagra.0402s0077
Capsella grandiflora
Cagra.0402s0077
I
Cagra.4153s0001
Capsella grandiflora
Cagra.4153s0001
I
Carubv10011133m.g
Capsella rubella
Carubv10011133m.g
I
Carubv10021541m.g
Capsella rubella
Carubv10021541m.g
I
evm.TU.supercontig_423.7
Carica papaya
evm.TU.supercontig_423.7
I
gene26015-v1.0-hybrid
Fragaria vesca
gene26015-v1.0-hybrid
I
Gorai.006G266900
Gossypium raimondii
Gorai.006G266900
I
Gorai.008G193400
Gossypium raimondii
Gorai.008G193400
I
Lus10034456.g
Linum usitatissimum
Lus10034456.g
I
Lus10035008.g
Linum usitatissimum
Lus10035008.g
I
MDP0000261199
Malus domestica
MDP0000261199
I
MDP0000266172
Malus domestica
MDP0000266172
I
orange1.1g036926m.g
Citrus sinensis
orange1.1g036926m.g
I
Pavir.Aa00708
Panicum virgatum
Pavir.Aa00708
I
Pavir.Ab02992
Panicum virgatum
Pavir.Ab02992
I
Pavir.Da01160
Panicum virgatum
Pavir.Da01160
I
Pavir.J13146
Panicum virgatum
Pavir.J13146
I
Thhalv10019554m.g
Eutrema salsugineum
Thhalv10019554m.g
I
chr4.CM0087.990.nc
Lotus japonicus
chr4.CM0087.990.nc
I
PDK_20s1383532g001
Phoenix dactylifera
PDK_20s1383532g001
I
AMTR_s00021p00218190
Amborella trichopoda
AMTR_s00021p00218190
N
RKD3
Arabidopsis thaliana
AT5G66990
N
BGIOSGA001434
Oryza indica
BGIOSGA001434
N
BRADI1G45170
Brachypodium distachyon
BRADI1G45170
N
BRADI2G40920
Brachypodium distachyon
BRADI2G40920
N
BRADI3G59410
Brachypodium distachyon
BRADI3G59410
N
F775_03178
Aegilops tauschii
F775_03178
N
GRMZM2G071322
Zea mays
GRMZM2G071322
N
GSMUA_Achr4G08610_001
Musa acuminata
GSMUA_Achr4G08610_001
N
GSMUA_AchrUn_randomG11290_001
Musa acuminata
GSMUA_AchrUn_randomG11290_001
N
LPERR01G16660
Leersia perrieri
LPERR01G16660
N
LPERR02G26470
Leersia perrieri
LPERR02G26470
N
OBART01G19230
Oryza barthii
OBART01G19230
N
OGLUM01G22860
Oryza glumaepatula
OGLUM01G22860
N
ONIVA01G21910
Oryza nivara
ONIVA01G21910
N
OPUNC01G19590
Oryza punctata
OPUNC01G19590
N
ORUFI01G21630
Oryza rufipogon
ORUFI01G21630
N
Sb03g025130
Sorghum bicolor
Sb03g025130
N
Sb04g028040
Sorghum bicolor
Sb04g028040
N
Si005102m.g
Setaria italica
Si005102m.g
N
Si019159m.g
Setaria italica
Si019159m.g
N
fgenesh1_pg.scaffold_823000001
Physcomitrella patens
fgenesh1_pg.scaffold_823000001
N
Bostr.0568s0123
Boechera stricta
Bostr.0568s0123
N
Cagra.2007s0003
Capsella grandiflora
Cagra.2007s0003
N
Carubv10027579m.g
Capsella rubella
Carubv10027579m.g
N
Pavir.Ea01492
Panicum virgatum
Pavir.Ea01492
N
Pavir.Eb01347
Panicum virgatum
Pavir.Eb01347
N
Pavir.J14787
Panicum virgatum
Pavir.J14787
N
Thhalv10005560m.g
Eutrema salsugineum
Thhalv10005560m.g
N
PDK_20s1788591g001
Phoenix dactylifera
PDK_20s1788591g001
N