PTF1A (Otolemur garnettii)
bHLH

TF Information

Pfam ID Interpro ID Gene ID CIS-BP ID Sequence source Animal TF db
PF00010 (HLH) IPR001092 ENSOGAG00000024685 T036140_2.00 Ensembl (2018-Dec-8) Link out

Directly determined binding motifs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
No direct experiments

Motifs from related TFs

Name/Motif ID Species Forward Reverse Type/Study/Study ID SR
Score		 DBD
Identity
PTF1A
M04156_2.00 		Homo sapiens
AACAGCTGACRB
VYGTCAGCTGTT		 SELEX
Yin et al.(2017)
PTF1A_eDBD_HT-SELEX 		0.914 1.000
PTF1A
M08736_2.00 		Homo sapiens
SCAGCTGBYNBNNYYYHN
NDRRRNNVNRVCAGCTGS		 Misc
Kulakovskiy et al.(2013)
PTF1A_HUMAN.H11MO.0.B 		0.914 1.000
Ptf1a
M08757_2.00 		Mus musculus
SCAGCTGBYNBNNYYYHN
NDRRRNNVNRVCAGCTGS		 Misc
Kulakovskiy et al.(2013)
PTF1A_MOUSE.H11MO.0.A 		0.914 1.000
Ptf1a
M09470_2.00 		Mus musculus
NVVCASSTGB
VCASSTGBBN		 Misc
Heinz et al.(2010)
Panc1-Ptf1a_GSE47459 		0.914 1.000
PTF1A
M04157_2.00 		Homo sapiens
AMCAGCTGACRB
VYGTCAGCTGKT		 SELEX
Yin et al.(2017)
PTF1A_eDBD_Methyl-HT-SELEX 		0.914 1.000
Fer1
M03620_2.00 		Drosophila melanogaster
VDCASCTGHY
RDCAGSTGHB		 SELEX
Nitta et al.(2015)
Fer1_1 		0.894 0.865
Fer1
M05990_2.00 		Drosophila melanogaster
HVCASMTGWCV
BGWCAKSTGBD		 B1H
Zhu et al.(2011)
Fer1_da_SANGER_10_FBgn0037475 		0.894 0.865
Fer1
M05991_2.00 		Drosophila melanogaster
WYRHCAGCTGACG
CGTCAGCTGDYRW		 B1H
Zhu et al.(2011)
Fer1_SANGER_5_FBgn0037475 		0.894 0.865
For this family, TFs with SR scores > 0.838 will likely have a similar motif

DNA Binding Domains

Protein ID Domain From To Sequence
ENSOGAP00000022271 bHLH 162 214

Links

Other bHLH family TFs
Other Otolemur garnettii TFs

131 Related TFs

Name Species Gene ID Motif Evidence SR
Score		 Action
PTF1A Homo sapiens ENSG00000168267 D 0.914
Ptf1a Mus musculus ENSMUSG00000026735 D 0.914
Fer1 Drosophila melanogaster FBgn0037475 D 0.894
CpipJ_CPIJ006258 Culex pipiens CpipJ_CPIJ006258 I 0.870
AAEL008660 Aedes aegypti AAEL008660 I 0.870
ACEP14483 Atta cephalotes ACEP14483 I 0.855
ACYPI37626 Acyrthosiphon pisum ACYPI37626 I 0.894
ADAC008497 Anopheles darlingi ADAC008497 I 0.870
AGAP001448 Anopheles gambiae AGAP001448 I 0.870
CapteG59283 Capitella teleta CapteG59283 I 0.846
CGI_10017809 Crassostrea gigas CGI_10017809 I 0.894
CPIJ006258 Culex quinquefasciatus CPIJ006258 I 0.870
DAPPUDRAFT_18360 Daphnia pulex DAPPUDRAFT_18360 I 0.890
EFV58245 Trichinella spiralis EFV58245 I 0.890
PTF1A Anolis carolinensis ENSACAG00000008717 I 0.913
ENSAMEG00000006374 Ailuropoda melanoleuca ENSAMEG00000006374 I 0.914
ENSAMXG00000008222 Astyanax mexicanus ENSAMXG00000008222 I 0.890
PTF1A Bos taurus ENSBTAG00000047315 I 0.914
PTF1A Callithrix jacchus ENSCJAG00000007862 I 0.914
PTF1A Cavia porcellus ENSCPOG00000022828 I 0.914
ENSCSAG00000012422 Chlorocebus sabaeus ENSCSAG00000012422 I 0.914
ptf1a Danio rerio ENSDARG00000014479 I 0.890
PTF1A Dasypus novemcinctus ENSDNOG00000035978 I 0.914
PTF1A Equus caballus ENSECAG00000012711 I 0.914
ENSFALG00000007280 Ficedula albicollis ENSFALG00000007280 I 0.914
ptf1a Gasterosteus aculeatus ENSGACG00000014760 I 0.890
PTF1A Gorilla gorilla ENSGGOG00000015210 I 0.914
ENSGMOG00000016849 Gadus morhua ENSGMOG00000016849 I 0.890
ENSLACG00000013727 Latimeria chalumnae ENSLACG00000013727 I 0.914
PTF1A Loxodonta africana ENSLAFG00000012682 I 0.914
ENSLOCG00000003186 Lepisosteus oculatus ENSLOCG00000003186 I 0.890
ENSMEUG00000004292 Macropus eugenii ENSMEUG00000004292 I 0.914
PTF1A Myotis lucifugus ENSMLUG00000010122 I 0.914
PTF1A Monodelphis domestica ENSMODG00000008946 I 0.914
ENSNLEG00000012897 Nomascus leucogenys ENSNLEG00000012897 I 0.914
ENSONIG00000016978 Oreochromis niloticus ENSONIG00000016978 I 0.890
ptf1a Oryzias latipes ENSORLG00000008277 I 0.890
ENSPANG00000023093 Papio anubis ENSPANG00000023093 I 0.914
PTF1A Procavia capensis ENSPCAG00000005440 I 0.914
ENSPFOG00000002486 Poecilia formosa ENSPFOG00000002486 I 0.890
ENSPMAG00000003727 Petromyzon marinus ENSPMAG00000003727 I 0.870
ENSPPYG00000002150 Pongo abelii ENSPPYG00000002150 I 0.914
ENSPSIG00000007810 Pelodiscus sinensis ENSPSIG00000007810 I 0.914
ENSPVAG00000013738 Pteropus vampyrus ENSPVAG00000013738 I 0.914
Ptf1a Rattus norvegicus ENSRNOG00000016902 I 0.914
PTF1A Sus scrofa ENSSSCG00000030662 I 0.914
ENSSTOG00000022679 Ictidomys tridecemlineatus ENSSTOG00000022679 I 0.914
PTF1A Tupaia belangeri ENSTBEG00000005210 I 0.879
ENSTGUG00000001180 Taeniopygia guttata ENSTGUG00000001180 I 0.914
ptf1a Takifugu rubripes ENSTRUG00000007713 I 0.890
PTF1A Tursiops truncatus ENSTTRG00000016843 I 0.914
ENSXMAG00000015151 Xiphophorus maculatus ENSXMAG00000015151 I 0.890
GF17655 Drosophila ananassae FBgn0094673 I 0.894
GG13863 Drosophila erecta FBgn0106126 I 0.894
GH19006 Drosophila grimshawi FBgn0126473 I 0.894
GI23061 Drosophila mojavensis FBgn0145788 I 0.894
GL12422 Drosophila persimilis FBgn0150028 I 0.894
GM10936 Drosophila sechellia FBgn0165881 I 0.894
GD19915 Drosophila simulans FBgn0191398 I 0.894
GJ24574 Drosophila virilis FBgn0211653 I 0.894
GK14521 Drosophila willistoni FBgn0216527 I 0.894
GE24907 Drosophila yakuba FBgn0242002 I 0.894
GA27498 Drosophila pseudoobscura FBgn0248864 I 0.894
GB41913 Apis mellifera GB41913 I 0.855
HelroG86431 Helobdella robusta HelroG86431 I 0.870
ISCW003737 Ixodes scapularis ISCW003737 I 0.890
KGM_14030 Danaus plexippus KGM_14030 I 0.890
L798_11980 Zootermopsis nevadensis L798_11980 I 0.914
LotgiG66849 Lottia gigantea LotgiG66849 I 0.890
MESCA008421 Megaselia scalaris MESCA008421 I 0.870
NEMVEDRAFT_v1g97005 Nematostella vectensis NEMVEDRAFT_v1g97005 I 0.870
PHUM498120 Pediculus humanus PHUM498120 I 0.914
RPRC001881 Rhodnius prolixus RPRC001881 I 0.894
SMAR009985 Strigamia maritima SMAR009985 I 0.890
SMAR011911 Strigamia maritima SMAR011911 I 0.890
SPU_002677 Strongylocentrotus purpuratus SPU_002677 I 0.866
TC014105 Tribolium castaneum TC014105 I 0.914
YQE_02105 Dendroctonus ponderosae YQE_02105 I 0.914
Cflo_06174--XP_001120620.1_APIME Camponotus floridanus Cflo_06174--XP_001120620.1_APIME I 0.855
Hsal_01096--XP_001120922.1_APIME Harpegnathos saltator Hsal_01096--XP_001120922.1_APIME I 0.855
Pvit_04136 Pogona vitticeps Pvit_04136 I 0.914
estExt_fgenesh2_pg.C_640081 Branchiostoma floridae estExt_fgenesh2_pg.C_640081 I 0.914
estExt_GenewiseH_1.C_3210010 Branchiostoma floridae estExt_GenewiseH_1.C_3210010 I 0.914
estExt_GenewiseH_1.C_3210011 Branchiostoma floridae estExt_GenewiseH_1.C_3210011 I 0.914
Ocbimv22012139m.g Octopus bimaculoides Ocbimv22012139m.g I 0.870
Sakowv30041452m.g Saccoglossus kowalevskii Sakowv30041452m.g I 0.894
CLEC012470 Cimex lectularius CLEC012470 I 0.894
LCUP002382 Lucilia cuprina LCUP002382 I 0.894
LDEC016362 Leptinotarsa decemlineata LDEC016362 I 0.914
SMU15024587 Schmidtea mediterranea SMU15024587 I 0.870
SMU15028020 Schmidtea mediterranea SMU15028020 I 0.870
SMU15033768 Schmidtea mediterranea SMU15033768 I 0.869
ptf1a Xenopus tropicalis XB-GENE-484425 I 0.914
ptf1a.S Xenopus laevis XB-GENE-6466546 I 0.914
AALB002674 Anopheles albimanus AALB002674 I 0.870
AARA001906 Anopheles arabiensis AARA001906 I 0.870
AATE014019 Anopheles atroparvus AATE014019 I 0.870
ACHR004799 Anopheles christyi ACHR004799 I 0.870
ACOM034154 Anopheles coluzzii ACOM034154 I 0.870
ACUA004590 Anopheles culicifacies ACUA004590 I 0.870
ADIR010545 Anopheles dirus ADIR010545 I 0.870
AEPI006242 Anopheles epiroticus AEPI006242 I 0.870
AFAF002909 Anopheles farauti AFAF002909 I 0.870
AFUN008310 Anopheles funestus AFUN008310 I 0.870
AMAM018725 Anopheles maculatus AMAM018725 I 0.870
AMEC009154 Anopheles melas AMEC009154 I 0.870
AMEM011331 Anopheles merus AMEM011331 I 0.870
AMIN003266 Anopheles minimus AMIN003266 I 0.870
AQUA006634 Anopheles quadriannulatus AQUA006634 I 0.870
ASIS019386 Anopheles sinensis ASIS019386 I 0.870
BGLB003958 Biomphalaria glabrata BGLB003958 I 0.914
LLOJ003726 Lutzomyia longipalpis LLOJ003726 I 0.870
LLOJ004204 Lutzomyia longipalpis LLOJ004204 I 0.870
LLOJ005004 Lutzomyia longipalpis LLOJ005004 I 0.870
MDOA013156 Musca domestica MDOA013156 I 0.894
PPAI005132 Phlebotomus papatasi PPAI005132 I 0.870
csin111295 Clonorchis sinensis csin111295 I 0.870
D915_00775 Fasciola hepatica D915_00775 I 0.870
D917_00545 Trichinella nativa D917_00545 I 0.890
D918_01499 Trichuris suis D918_01499 I 0.870
DILT_0001058801 Diphyllobothrium latum DILT_0001058801 I 0.857
ECANG7_07852 Echinococcus canadensis ECANG7_07852 I 0.846
ECPE_0000418201 Echinostoma caproni ECPE_0000418201 I 0.870
EmuJ_000998300 Echinococcus multilocularis EmuJ_000998300 I 0.846
HmN_000218700 Hymenolepis microstoma HmN_000218700 I 0.866
MCOS_0000879301 Mesocestoides corti MCOS_0000879301 I 0.846
SBAD_0000858001 Soboliphyme baturini SBAD_0000858001 I 0.868
SROB_0001629701 Schistosoma rodhaini SROB_0001629701 I 0.870
T265_12589 Opisthorchis viverrini T265_12589 I 0.870
TMUE_s0036001100 Trichuris muris TMUE_s0036001100 I 0.870
TTRE_0000022101 Trichuris trichiura TTRE_0000022101 I 0.870