CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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hand2
(
Oryzias latipes
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSORLG00000010967
T036427_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
HAND2
M04150_2.00
Homo sapiens
MACACCTGBD
HVCAGGTGTK
SELEX
Yin et al.(2017)
HAND2_eDBD_HT-SELEX
0.914
0.962
HAND2
M04151_2.00
Homo sapiens
MACACCTGYD
HRCAGGTGTK
SELEX
Yin et al.(2017)
HAND2_eDBD_Methyl-HT-SELEX
0.914
0.962
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSORLP00000013755
bHLH
102
154
RRPTANRKERRRTQSINSAFAELRECIPNVPADTKLSKIKTLRLATSYISYLM
Links
Other
bHLH
family TFs
Other
Oryzias latipes
TFs
101 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
FGRRES_17150
Fusarium graminearum
FGRRES_17150
D
FFUJ_14508
Fusarium fujikuroi
FFUJ_14508
I
FOXG_03765
Fusarium oxysporum
FOXG_03765
I
SNOG_10151
Stagonospora nodorum
SNOG_10151
N
CH063_14646
Colletotrichum higginsianum
CH063_14646
N
COCC4DRAFT_149555
Bipolaris maydis
COCC4DRAFT_149555
N
COCMIDRAFT_87622
Bipolaris oryzae
COCMIDRAFT_87622
N
PTRG_02110
Pyrenophora triticirepentis
PTRG_02110
N
SNOG_10151
Phaeosphaeria nodorum
SNOG_10151
N
estExt_Genewise1Plus.C_220030
Cochliobolus heterostrophus C5
estExt_Genewise1Plus.C_220030
N