CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSPSIG00000016504
(
Pelodiscus sinensis
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSPSIG00000016504
T036983_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
Bhlhe41
M01739_2.00
Mus musculus
NMNCGTGMN
NKCACGNKN
PBM
Weirauch et al.(2014)
pTH5060
0.914
1.000
BHLHE41
M02782_2.00
Homo sapiens
NKCACGTGMN
NKCACGTGMN
SELEX
Jolma et al.(2013)
BHLHB3_1
0.914
1.000
BHLHE41
M02783_2.00
Homo sapiens
RKCACGTGAY
RTCACGTGMY
SELEX
Jolma et al.(2013)
BHLHE41_1
0.914
1.000
BHLHE41
M04106_2.00
Homo sapiens
VTCACGTGAB
VTCACGTGAB
SELEX
Yin et al.(2017)
BHLHE41_eDBD_HT-SELEX
0.914
1.000
BHLHE41
M09833_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DEC2_Q2
0.914
1.000
BHLHE41
M09834_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DEC2_Q3
0.914
1.000
BHLHE41
M04107_2.00
Homo sapiens
RTCACGTGAY
RTCACGTGAY
SELEX
Yin et al.(2017)
BHLHE41_eDBD_Methyl-HT-SELEX
0.914
1.000
Bhlhe40
M00119_2.00
Mus musculus
DCACGTGMN
NKCACGTGH
PBM
Badis et al.(2009)
Bhlhb2_1274
0.914
0.981
Bhlhe40
M01738_2.00
Mus musculus
NCACRNBN
NVNYGTGN
PBM
Weirauch et al.(2014)
pTH4330
0.914
0.981
BHLHE40
M02788_2.00
Homo sapiens
NKCACGTGMH
DKCACGTGMN
SELEX
Jolma et al.(2013)
BHLHB2_1
0.914
0.981
Bhlhe40
M02817_2.00
Mus musculus
NKCACGTGMN
NKCACGTGMN
SELEX
Jolma et al.(2013)
Bhlhb2_1
0.914
0.981
Bhlhe40
M02818_2.00
Mus musculus
NKCACGTGMN
NKCACGTGMN
SELEX
Jolma et al.(2013)
Bhlhb2_2
0.914
0.981
BHLHE40
M04126_2.00
Homo sapiens
VTCACGTGAB
VTCACGTGAB
SELEX
Yin et al.(2017)
BHLHE40_eDBD_HT-SELEX
0.914
0.981
BHLHE40
M07798_2.00
Homo sapiens
DCACGTGMSN
NSKCACGTGH
ChIP-seq
Gerstein et al.(2012)
HepG2_BHLHE40_HudsonAlpha
0.914
0.981
BHLHE40
M08726_2.00
Homo sapiens
DDCACGTGMS
SKCACGTGHH
Misc
Kulakovskiy et al.(2013)
BHE40_HUMAN.H11MO.0.A
0.914
0.981
Bhlhe40
M08761_2.00
Mus musculus
DCACGTGMS
SKCACGTGH
Misc
Kulakovskiy et al.(2013)
BHE40_MOUSE.H11MO.0.A
0.914
0.981
BHLHE40
M09456_2.00
Homo sapiens
DCACGTGMNN
NNKCACGTGH
Misc
Heinz et al.(2010)
HepG2-BHLHE40_GSE31477
0.914
0.981
BHLHE40
M09842_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$BHLHE40_03
0.914
0.981
BHLHE40
M09843_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DEC1_Q2
0.914
0.981
BHLHE40
M09844_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$DEC1_Q3
0.914
0.981
BHLHE40
M09845_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$STRA13_01
0.914
0.981
BHLHE40
M04127_2.00
Homo sapiens
RTCACGTGAY
RTCACGTGAY
SELEX
Yin et al.(2017)
BHLHE40_eDBD_Methyl-HT-SELEX
0.914
0.981
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSPSIP00000018600
bHLH
46
100
KLPHRLIEKKRRDRINECIAQLKDLLPEHLKLTTLGHLEKAVVLELTLKHLKALT
Links
Other
bHLH
family TFs
Other
Pelodiscus sinensis
TFs
117 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
FEZF2
Gorilla gorilla
ENSGGOG00000026200
I
FEZF1
Tupaia belangeri
ENSTBEG00000005307
N
SPER_0000393601
Spirometra erinaceieuropaei
SPER_0000393601
N
csin109610
Clonorchis sinensis
csin109610
N
Ogr03134
Ophisaurus gracilis
Ogr03134
N
Myotis_brandtii_AASS_10009316
Myotis brandtii
Myotis_brandtii_AASS_10009316
N
Cmyd_10003456
Chelonia mydas
Cmyd_10003456
N
Alligator_sinensis_CCG021039.1
Alligator sinensis
Alligator_sinensis_CCG021039.1
N
NEMVEDRAFT_v1g230810
Nematostella vectensis
NEMVEDRAFT_v1g230810
N
KGM_06814
Danaus plexippus
KGM_06814
N
FEZF1
Vicugna pacos
ENSVPAG00000002991
N
ENSTTRG00000013155
Tursiops truncatus
ENSTTRG00000013155
N
Fezf2
Dipodomys ordii
ENSDORG00000000030
N
FEZF1
Pan troglodytes
ENSPTRG00000019631
N
ENSPPYG00000017951
Pongo abelii
ENSPPYG00000017951
N
FEZF1
Procavia capensis
ENSPCAG00000011405
N
FEZF1
Ochotona princeps
ENSOPRG00000015502
N
ENSMICG00000001950
Microcebus murinus
ENSMICG00000001950
N
FEZF1
Echinops telfairi
ENSETEG00000020278
N
FEZF1
Erinaceus europaeus
ENSEEUG00000002685
N
ENSDORG00000002484
Dipodomys ordii
ENSDORG00000002484
N