CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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ENSSSCG00000016637
(
Sus scrofa
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
ENSSSCG00000016637
T037443_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
TFEC
M02778_2.00
Homo sapiens
RNCACRTGAB
VTCAYGTGNY
SELEX
Jolma et al.(2013)
TFEC_1
0.914
1.000
TFEC
M04078_2.00
Homo sapiens
NVCACGTGACN
NGTCACGTGBN
SELEX
Yin et al.(2017)
TFEC_eDBD_HT-SELEX
0.914
1.000
TFEC
M04079_2.00
Homo sapiens
VNCATGTGAYN
NRTCACATGNB
SELEX
Yin et al.(2017)
TFEC_eDBD_Methyl-HT-SELEX
0.914
1.000
Tfec
M00755_2.00
Mus musculus
NNCACGTGNN
NNCACGTGNN
PBM
Weirauch et al.(2013)
pTH2885
0.914
0.981
Tfec
M01736_2.00
Mus musculus
NCNCRTGVYN
NRBCAYGNGN
PBM
Weirauch et al.(2014)
pTH5065
0.914
0.981
Mitf
M01741_2.00
Mus musculus
NCDCGTGAYN
NRTCACGHGN
PBM
Weirauch et al.(2014)
pTH5465
0.870
0.907
MITF
M08058_2.00
Homo sapiens
NNNDRTCACGTGAYHNNN
NNNDRTCACGTGAYHNNN
ChIP-seq
Mathelier et al.(2014)
MA0620.2
0.870
0.907
MITF
M08740_2.00
Homo sapiens
YCAYGTGACH
DGTCACRTGR
Misc
Kulakovskiy et al.(2013)
MITF_HUMAN.H11MO.0.A
0.870
0.907
Mitf
M08765_2.00
Mus musculus
BCHYGTGACY
RGTCACRDGV
Misc
Kulakovskiy et al.(2013)
MITF_MOUSE.H11MO.0.A
0.870
0.907
Mitf
M09475_2.00
Mus musculus
GTCACRWGVB
VBCWYGTGAC
Misc
Heinz et al.(2010)
MastCells-MITF_GSE48085
0.870
0.907
MITF
M09880_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MITF_Q4
0.870
0.907
MITF
M09881_2.00
Homo sapiens
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$MITF_Q6
0.870
0.907
Tfe3
M01715_2.00
Mus musculus
NCDCRTGAYN
NRTCAYGHGN
PBM
Weirauch et al.(2014)
pTH5057
0.870
0.889
Tfe3
M05833_2.00
Mus musculus
CACGTGAY
RTCACGTG
SMiLE-seq
Isakova et al.(2017)
TFE3
0.870
0.889
Tfe3
M08743_2.00
Mus musculus
TCACGTGACH
DGTCACGTGA
Misc
Kulakovskiy et al.(2013)
TFE3_MOUSE.H11MO.0.A
0.870
0.889
Tfe3
M09884_2.00
Mus musculus
Transfac license required
Transfac license required
Transfac
Matys et al.(2006)
V$TFEA_01
0.870
0.889
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
ENSSSCP00000017625
bHLH
111
164
KKDNHNLIERRRRYNINYRIKELGTLIPKSNDPDMRWNKGTILKASVEYIKWLQ
ENSSSCP00000021592
bHLH
140
193
KKDNHNLIERRRRYNINYRIKELGTLIPKSNDPDMRWNKGTILKASVEYIKWLQ
Links
Other
bHLH
family TFs
Other
Sus scrofa
TFs
149 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
ZNF322
Homo sapiens
ENSG00000181315
D
ENSMPUG00000018606
Mustela putorius furo
ENSMPUG00000018606
I
ENSP00000419728
Macaca fascicularis
ENSP00000419728
I
ENSBTAP00000031693-D1
Bos grunniens
ENSBTAP00000031693-D1
I
ZNF322
Sus scrofa
ENSSSCG00000001156
I
Zfp322a
Rattus norvegicus
ENSRNOG00000017318
I
ZNF322
Pan troglodytes
ENSPTRG00000017837
I
ENSPPYG00000016336
Pongo abelii
ENSPPYG00000016336
I
ZNF322
Procavia capensis
ENSPCAG00000014729
I
ENSOARG00000020046
Ovis aries
ENSOARG00000020046
I
ENSOARG00000018679
Ovis aries
ENSOARG00000018679
I
ENSBTAG00000031741
Bos taurus
ENSBTAG00000031741
I
ZNF322
Macaca mulatta
ENSMMUG00000017480
I
ENSMICG00000017437
Microcebus murinus
ENSMICG00000017437
I
ZNF322
Gorilla gorilla
ENSGGOG00000026339
I
ZNF322
Equus caballus
ENSECAG00000000889
I
ZNF322
Dasypus novemcinctus
ENSDNOG00000015534
I
ENSCSAG00000019088
Chlorocebus sabaeus
ENSCSAG00000019088
I
ZNF322
Callithrix jacchus
ENSCJAG00000011175
I
ZNF322
Canis familiaris
ENSCAFG00000030701
I