CIS-BP Database: Catalog of Inferred Sequence Binding Preferences
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GB54493
(
Apis mellifera
)
bHLH
TF Information
Pfam ID
Interpro ID
Gene ID
CIS-BP ID
Sequence source
Animal TF db
PF00010 (HLH)
IPR001092
GB54493
T039396_2.00
Ensembl (2018-Dec-8)
Link out
Directly determined binding motifs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
No direct experiments
Motifs from related TFs
Name/Motif ID
Species
Forward
Reverse
Type/Study/Study ID
SR
Score
DBD
Identity
ss
M05953_2.00
Drosophila melanogaster
SDTTGCGTGAC
GTCACGCAAHS
B1H
Zhu et al.(2011)
ss_tgo_SANGER_10_FBgn0003513
0.914
0.980
ss
M05954_2.00
Drosophila melanogaster
TGCGTGAC
GTCACGCA
B1H
Zhu et al.(2011)
tgo_ss_SANGER_5_FBgn0003513
0.914
0.980
For this family, TFs with SR scores >
0.838
will likely have a similar motif
DNA Binding Domains
Protein ID
Domain
From
To
Sequence
GB54493-PA
bHLH
50
100
VTKSNPSKRHRERLNAELDTLASLLPFEQNILSKLDRLSILRLSVSYLRTK
Links
Other
bHLH
family TFs
Other
Apis mellifera
TFs
45 Related TFs
Name
Species
Gene ID
Motif Evidence
SR
Score
Action
SNOG_12765
Phaeosphaeria nodorum
SNOG_12765
N
NEUTE1DRAFT_145502
Neurospora tetrasperma
NEUTE1DRAFT_145502
N
OIDMADRAFT_72735
Oidiodendron maius
OIDMADRAFT_72735
N
PDIP_15270
Penicillium digitatum
PDIP_15270
N
PEX1_055770
Penicillium expansum
PEX1_055770
N
PV11_07762
Exophiala sideris
PV11_07762
N
S40285_04014
Stachybotrys chlorohalonata
S40285_04014
N
S40288_02610
Stachybotrys chartarum
S40288_02610
N
SETTUDRAFT_155346
Setosphaeria turcica
SETTUDRAFT_155346
N
MCYG_02571
Arthroderma otae
MCYG_02571
N
TEQG_05685
Trichophyton equinum
TEQG_05685
N
TESG_07096
Trichophyton tonsurans
TESG_07096
N
U727_00430311441
Penicillium solitum
U727_00430311441
N
UV8b_3206
Ustilaginoidea virens
UV8b_3206
N
VDAG_09033
Verticillium dahliae
VDAG_09033
N
VDBG_04344
Verticillium alfalfae
VDBG_04344
N
W97_05320
Coniosporium apollinis
W97_05320
N
MCYG_02571
Microsporum canis
MCYG_02571
N
LEMA_P057910.1
Leptosphaeria maculans
LEMA_P057910.1
N
HCBG_07168
Histoplasma capsulatum
HCBG_07168
N
H105_03019
Trichophyton soudanense
H105_03019
N
H102_02999
Trichophyton rubrum
H102_02999
N
GSTUM_00009064001
Tuber melanosporum
GSTUM_00009064001
N
FFUJ_12262
Fusarium fujikuroi
FFUJ_12262
N
F503_04971
Ophiostoma piceae uamh
F503_04971
N
CTHT_0034060
Chaetomium thermophilum
CTHT_0034060
N
CSUB01_01897
Colletotrichum sublineola
CSUB01_01897
N
CMQ_1168
Grosmannia clavigera
CMQ_1168
N
CH063_08271
Colletotrichum higginsianum
CH063_08271
N
CADANGAG00011028
Aspergillus niger
CADANGAG00011028
N
AFUA_4G03960
Aspergillus fumigatus
CADAFUAG00001413
N
ACRE_078720
Acremonium chrysogenum
ACRE_078720
N
VDBG_04344
Verticillium albo atrum
VDBG_04344
N